RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CEP128Q6ZU80 1094 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 MOB2Q70IA6 237 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 PLPPR4Q7Z2D5 763 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 KIF2BQ8N4N8 673 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 HSPH1Q92598 858 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
LIN54-207ENST00000508171 BAIAP2L1Q9UHR4 511 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 SHOC2Q9UQ13 582 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 CSADQ9Y600 493 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 CLUHO75153 1309 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 MIPP30301 263 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 TFDP1Q14186 410 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 SLC1A5Q15758 541 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 GJC2Q5T442 439 aaPredicted RBP11.47□□□□□ -0.57
LIN54-207ENST00000508171 SYCP2LQ5T4T6 812 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 WDR78Q5VTH9 848 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 ECHDC2Q86YB7 292 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 TDRPQ86YL5 185 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 KCTD6Q8NC69 237 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 NLGN2Q8NFZ4 835 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 UBA3Q8TBC4 463 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 WDR83Q9BRX9 315 aaKnown RBP11.47□□□□□ -0.57
LIN54-207ENST00000508171 ELOVL4Q9GZR5 314 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 IFT122Q9HBG6 1241 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 RBPJLQ9UBG7 517 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 TRIP11Q15643 1979 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 MED7O43513 233 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 GAS2O43903 313 aaKnown RBP11.46□□□□□ -0.57
LIN54-207ENST00000508171 ATP6V1G2O95670 118 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 KRT7P08729 469 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 TXNP10599 105 aaKnown RBP11.46□□□□□ -0.57
LIN54-207ENST00000508171 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 HADHQ16836 314 aaKnown RBP11.46□□□□□ -0.57
LIN54-207ENST00000508171 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 BBS12Q6ZW61 710 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 FAM71DQ8N9W8 422 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 PYROXD1Q8WU10 500 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 RSAD2Q8WXG1 361 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 CPB2Q96IY4 423 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 CALN1Q9BXU9 219 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 OTOFQ9HC10 1997 aa11.46□□□□□ -0.57
LIN54-207ENST00000508171 CENPFP49454 3210 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 MICAL2O94851 1124 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 STAG3L1P0CL83 205 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 FGFR1P11362 822 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 CA4P22748 312 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 PTPN11Q06124 597 aaPredicted RBP11.46□□□□□ -0.58
LIN54-207ENST00000508171 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.58
LIN54-207ENST00000508171 E2F5Q15329 346 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 MAP1SQ66K74 1059 aaPredicted RBP11.46□□□□□ -0.58
LIN54-207ENST00000508171 NPNTQ6UXI9 565 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 C3orf62Q6ZUJ4 267 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 RFX6Q8HWS3 928 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 GPC2Q8N158 579 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 NAT8LQ8N9F0 302 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 CXorf38Q8TB03 319 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 SMC6Q96SB8 1091 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 C12orf65Q9H3J6 166 aaKnown RBP11.46□□□□□ -0.58
LIN54-207ENST00000508171 RXFP1Q9HBX9 757 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 NOD2Q9HC29 1040 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 KLHL14Q9P2G3 628 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 TNFSF13BQ9Y275 285 aa11.46□□□□□ -0.58
LIN54-207ENST00000508171 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
LIN54-207ENST00000508171 PRPF4O43172 522 aaKnown RBP eCLIP11.45□□□□□ -0.58
LIN54-207ENST00000508171 DDNO94850 711 aaPredicted RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 NQO1P15559 274 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 KRT4P19013 534 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 NR1H3Q13133 447 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 TAZQ16635 292 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 PPIL6Q8IXY8 311 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 CMASQ8NFW8 434 aaPredicted RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 FNIP1Q8TF40 1166 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 TBC1D31Q96DN5 1066 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 TMEM176AQ96HP8 235 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 PIWIL1Q96J94 861 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 HEXIM2Q96MH2 286 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 PEBP4Q96S96 227 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 USP18Q9UMW8 372 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 EFR3BQ9Y2G0 817 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 PPME1Q9Y570 386 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 A0A087WZ62 844 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 A0A0G2JLL6 359 aaPredicted RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 M0QYV0 167 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 TYROBPO43914 113 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 CILPO75339 1184 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 GRAP2O75791 330 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 TMEM63AO94886 807 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 TRUB2O95900 331 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 RDXP35241 583 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 GPD2P43304 727 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 GEMIN4P57678 1058 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 ZNF268Q14587 947 aaPredicted RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 TRNP1Q6NT89 227 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 PRRT2Q7Z6L0 340 aaPredicted RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 ZC3H18Q86VM9 953 aaKnown RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 FBXO36Q8NEA4 188 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 FBF1Q8TES7 1133 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms