RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 MIPP30301 263 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 COPS2P61201 443 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 MMRN1Q13201 1228 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 TAPT1Q6NXT6 567 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 NIPA2Q8N8Q9 360 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 LHX5Q9H2C1 402 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 STX2P32856 288 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 LAMC2Q13753 1193 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 KIZQ2M2Z5 673 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 C15orf59Q2T9L4 293 aaPredicted RBP23.12■■□□□ 1.29
SPCS3-203ENST00000507678 ANKRD22Q5VYY1 191 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 RSAD2Q8WXG1 361 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 RNF8O76064 485 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 KRT7P08729 469 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 EPHX2P34913 555 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 CTCFP49711 727 aaPredicted RBP23.12■■□□□ 1.29
SPCS3-203ENST00000507678 MYO1EQ12965 1108 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 ZNF484Q5JVG2 852 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 OR6B2Q6IFH4 312 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 SLC10A4Q96EP9 437 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 KIF12Q96FN5 646 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 CFAP57Q96MR6 1250 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 FAM49AQ9H0Q0 323 aaPredicted RBP23.12■■□□□ 1.29
SPCS3-203ENST00000507678 ANK1P16157 1881 aa23.12■■□□□ 1.29
SPCS3-203ENST00000507678 MCF2P10911 925 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 SNAPC2Q13487 334 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 STAT4Q14765 748 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 FAM133BQ5BKY9 247 aaKnown RBP23.11■■□□□ 1.29
SPCS3-203ENST00000507678 NPNTQ6UXI9 565 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 GPRC5AQ8NFJ5 357 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 CCHCR1Q8TD31 782 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.11■■□□□ 1.29
SPCS3-203ENST00000507678 DNAH12Q6ZR08 3092 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 MAP3K6O95382 1288 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 ATP11AP98196 1134 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 RNASEH2BQ5TBB1 312 aaKnown RBP23.11■■□□□ 1.29
SPCS3-203ENST00000507678 ZC3H18Q86VM9 953 aaKnown RBP23.11■■□□□ 1.29
SPCS3-203ENST00000507678 FAM71DQ8N9W8 422 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 DPP3Q9NY33 737 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 USP18Q9UMW8 372 aa23.11■■□□□ 1.29
SPCS3-203ENST00000507678 H3BRB1 525 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 ITGAVP06756 1048 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 KRT15P19012 456 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 TNFAIP2Q03169 654 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 DRICH1Q6PGQ1 229 aaPredicted RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 UNC45BQ8IWX7 931 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 C4orf33Q8N1A6 199 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 SLC35B2Q8TB61 432 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 CCT6BQ92526 530 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 ACAP3Q96P50 834 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 NSRP1Q9H0G5 558 aaKnown RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 TUT1Q9H6E5 874 aaKnown RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 FAM49BQ9NUQ9 324 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 NKIRAS1Q9NYS0 192 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 HES2Q9Y543 173 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 E5RJQ4 531 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 KIF1CO43896 1103 aaKnown RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 GPD2P43304 727 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 SCTRP47872 440 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 GLRA4Q5JXX5 417 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 SCYL2Q6P3W7 929 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 PIGWQ7Z7B1 504 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 CXorf38Q8TB03 319 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 LRRN4Q8WUT4 740 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 NKD2Q969F2 451 aaPredicted RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 THOC1Q96FV9 657 aaKnown RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 TSPAN16Q9UKR8 245 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 DRG1Q9Y295 367 aaKnown RBP23.1■■□□□ 1.29
SPCS3-203ENST00000507678 SBF1O95248 1867 aa23.1■■□□□ 1.29
SPCS3-203ENST00000507678 CYP3A5P20815 502 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 MORF4L2Q15014 288 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 MTHFD1LQ6UB35 978 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 POLNQ7Z5Q5 900 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 TGS1Q96RS0 853 aaKnown RBP23.09■■□□□ 1.29
SPCS3-203ENST00000507678 PCDH9Q9HC56 1237 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.09■■□□□ 1.29
SPCS3-203ENST00000507678 HAUS2Q9NVX0 235 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 DICER1Q9UPY3 1922 aaKnown RBP23.09■■□□□ 1.29
SPCS3-203ENST00000507678 TCRBV7S3A2A0A539 114 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 CCT8L1PA6NM43 557 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 TSPAN1O60635 241 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 P4HA1P13674 534 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 BASP1P80723 227 aaKnown RBP23.09■■□□□ 1.29
SPCS3-203ENST00000507678 EFTUD2Q15029 972 aaKnown RBP eCLIP23.09■■□□□ 1.29
SPCS3-203ENST00000507678 MAMDC4Q6UXC1 1216 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 CENPUQ71F23 418 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 PEBP4Q96S96 227 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 ABCF3Q9NUQ8 709 aa23.09■■□□□ 1.29
SPCS3-203ENST00000507678 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.09■■□□□ 1.29
SPCS3-203ENST00000507678 PDHXO00330 501 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 PPEF2O14830 753 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 GCAP28676 217 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 SSTR1P30872 391 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 CDH6P55285 790 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 EIF3EP60228 445 aaKnown RBP23.08■■□□□ 1.29
SPCS3-203ENST00000507678 PKN2Q16513 984 aaKnown RBP23.08■■□□□ 1.29
SPCS3-203ENST00000507678 HIF1AQ16665 826 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 FAM47EQ6ZV65 393 aa23.08■■□□□ 1.29
SPCS3-203ENST00000507678 PRCCQ92733 491 aaPredicted RBP23.08■■□□□ 1.29
SPCS3-203ENST00000507678 LPIN3Q9BQK8 851 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms