RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM6-205	ENST00000507449	FUBP1	Q96AE4	644 aa	Known RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	MOGAT1	Q96PD6	335 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	PPP1R9B	Q96SB3	815 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	PTDSS2	Q9BVG9	487 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	IGSF9	Q9P2J2	1179 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	SLC39A10	Q9ULF5	831 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	NDRG4	Q9ULP0	352 aa	Known RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	SHOC2	Q9UQ13	582 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	TSC22D4	Q9Y3Q8	395 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	NEU2	Q9Y3R4	380 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	SPATA31A3	Q5VYP0	1347 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	MYADML2	A6NDP7	307 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	UNC119B	A6NIH7	251 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	SOAT2	O75908	522 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	SPDEF	O95238	335 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	FOS	P01100	380 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	ERBB2	P04626	1255 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	TYRP1	P17643	537 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	DDX6	P26196	483 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	LRPAP1	P30533	357 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	BMPR1A	P36894	532 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	ITGA8	P53708	1063 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	RPS7	P62081	194 aa	Known RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	DGCR2	P98153	550 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	KRT17	Q04695	432 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	FPGS	Q05932	587 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	TP53BP2	Q13625	1128 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	STARD3	Q14849	445 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	PUM3	Q15397	648 aa	Known RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	RAB30	Q15771	203 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	ZNF750	Q32MQ0	723 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	MGAT5B	Q3V5L5	792 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	ARHGAP40	Q5TG30	622 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	RAP1GAP2	Q684P5	730 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	SP5	Q6BEB4	398 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	CRTC1	Q6UUV9	634 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	RNF207	Q6ZRF8	634 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	MICALCL	Q6ZW33	695 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	USP49	Q70CQ1	688 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	RHOU	Q7L0Q8	258 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	NKAP	Q8N5F7	415 aa	Known RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	IPO4	Q8TEX9	1081 aa	Known RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	CACTIN	Q8WUQ7	758 aa	Known RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	SNX19	Q92543	992 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	GALNT9	Q9HCQ5	603 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	HEYL	Q9NQ87	328 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM6-205	ENST00000507449	RGL1	Q9NZL6	768 aa		4.14	□□□□□ -1.75
LSM6-205	ENST00000507449		A0A0B4J269	797 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	CENPVL1	A0A0U1RR11	272 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	AQP12B	A6NM10	295 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	LGALS16	A8MUM7	142 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449		F5H697	171 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	PODXL	O00592	558 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	FFAR2	O15552	330 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	CDKL5	O76039	1030 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	VEGFA	P15692	232 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	CD6	P30203	668 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	PPIF	P30405	207 aa	Known RBP	4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	CHKA	P35790	457 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	HAL	P42357	657 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	COPA	P53621	1224 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	ZXDA	P98168	799 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	TUBB3	Q13509	450 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	INSC	Q1MX18	579 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	PREPL	Q4J6C6	727 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	CACHD1	Q5VU97	1274 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	ANO1	Q5XXA6	986 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	GGT6	Q6P531	493 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	LAYN	Q6UX15	382 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	GPR149	Q86SP6	731 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	ZNF527	Q8NB42	609 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	SLC30A5	Q8TAD4	765 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	DNAJB14	Q8TBM8	379 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	PPP2R3C	Q969Q6	453 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	MUL1	Q969V5	352 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	MYEOV	Q96EZ4	313 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	OSBPL9	Q96SU4	736 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	MAGEB5	Q9BZ81	275 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	AMBRA1	Q9C0C7	1298 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	PARPBP	Q9NWS1	579 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	SERTAD3	Q9UJW9	196 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	CEP83	Q9Y592	693 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	NOX1	Q9Y5S8	564 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	HS3ST4	Q9Y661	456 aa		4.13	□□□□□ -1.75
LSM6-205	ENST00000507449	GOLGA6L3	A6NEY3	463 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	ADM5	C9JUS6	153 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	AGPS	O00116	658 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	NPC1	O15118	1278 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	SRGAP2	O75044	1071 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	PIAS2	O75928	621 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	PDHA1	P08559	390 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	PPP3CB	P16298	524 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	TPH1	P17752	444 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	EGR1	P18146	543 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	LAG3	P18627	525 aa		4.12	□□□□□ -1.75
LSM6-205	ENST00000507449	ADORA2A	P29274	412 aa		4.12	□□□□□ -1.75

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