RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ZNF252P-AS1Q0IIN9 211 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 CDC16Q13042 620 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 CUL2Q13617 745 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 FAM102BQ5T8I3 360 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 RIPOR1Q6ZS17 1223 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 FAM160B2Q86V87 743 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 ULK2Q8IYT8 1036 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 ST13P4Q8IZP2 240 aaPredicted RBP18.58■□□□□ 0.56
NUP54-205ENST00000507257 RBM15BQ8NDT2 890 aaKnown RBP18.58■□□□□ 0.56
NUP54-205ENST00000507257 FAM81AQ8TBF8 368 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 EPB41L1Q9H4G0 881 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 PNPLA8Q9NP80 782 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 KMT5AQ9NQR1 393 aa18.58■□□□□ 0.56
NUP54-205ENST00000507257 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.56
NUP54-205ENST00000507257 SPECC1L-ADORA2AF8WAN1 911 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 BUD23O43709 281 aaKnown RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 HLA-DRAP01903 254 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 UBTFL6P0CB48 400 aaPredicted RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 TBXAS1P24557 533 aaPredicted RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 RTP1P59025 263 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 LSAMPQ13449 338 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 TAZQ16635 292 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 RASIP1Q5U651 963 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 ANKRD22Q5VYY1 191 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 ATG16L1Q676U5 607 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 PLA2G4FQ68DD2 849 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 MARK2Q7KZI7 788 aaKnown RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 OPTNQ96CV9 577 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 FAM111AQ96PZ2 611 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 TUBGCP5Q96RT8 1024 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 KLHL11Q9NVR0 708 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 NDUFA13Q9P0J0 144 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 H3BRJ5 948 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 I3L4J1 428 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 GOLGA8RI6L899 631 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 EXTL3O43909 919 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 BANF1O75531 89 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 LSM8O95777 96 aaKnown RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 IFNB1P01574 187 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 STIP1P31948 543 aaKnown RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 JAK3P52333 1124 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 CACNB3P54284 484 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 SPP2Q13103 211 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 PTK7Q13308 1070 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 GRM2Q14416 872 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 TKFCQ3LXA3 575 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 TBC1D25Q3MII6 688 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 LRRC23Q53EV4 343 aaPredicted RBP18.57■□□□□ 0.56
NUP54-205ENST00000507257 TREML1Q86YW5 311 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 PIP4K2CQ8TBX8 421 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 KCNN1Q92952 543 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 ZWILCHQ9H900 591 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 SLC7A8Q9UHI5 535 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 UBR3Q6ZT12 1888 aa18.57■□□□□ 0.56
NUP54-205ENST00000507257 ZNF646O15015 1829 aaPredicted RBP18.56■□□□□ 0.56
NUP54-205ENST00000507257 CFHP08603 1231 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 GYS1P13807 737 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 SFNP31947 248 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 RPL7AP62424 266 aaKnown RBP18.56■□□□□ 0.56
NUP54-205ENST00000507257 PABPC1LQ4VXU2 614 aaKnown RBP18.56■□□□□ 0.56
NUP54-205ENST00000507257 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 BBS12Q6ZW61 710 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 PODNQ7Z5L7 613 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 NME8Q8N427 588 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 TTC17Q96AE7 1141 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 SERAC1Q96JX3 654 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 NDNQ99608 321 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 SIKE1Q9BRV8 207 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 ADAM33Q9BZ11 813 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 ZNF180Q9UJW8 692 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 TMCO1Q9UM00 188 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 PCDHB4Q9Y5E5 795 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 IKBKGQ9Y6K9 419 aa18.56■□□□□ 0.56
NUP54-205ENST00000507257 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.56■□□□□ 0.56
NUP54-205ENST00000507257 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 FAM237BA0A1B0GVD1 139 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 C3orf70A6NLC5 250 aaPredicted RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 GOLGA8SH3BPF8 625 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 GOLGA8MH3BSY2 632 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 INHBAP08476 426 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 TCF4P15884 667 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 RPL22P35268 128 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 CLCN2P51788 898 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 ZNF132P52740 706 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 PLCB3Q01970 1234 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 MAP3K10Q02779 954 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 DBN1Q16643 649 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 XKR9Q5GH70 373 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 ZFYVE27Q5T4F4 411 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 LDHDQ86WU2 507 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 RDM1Q8NG50 284 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 KLF6Q99612 283 aaPredicted RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 CCDC106Q9BWC9 280 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 C12orf65Q9H3J6 166 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 SIRPGQ9P1W8 387 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 ATXN10Q9UBB4 475 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 HERC5Q9UII4 1024 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 SMIM31A0A1B0GVY4 71 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 H0YCG3 227 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms