RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 SREBF1P36956 1147 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 GRIA2P42262 883 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 LIFRP42702 1097 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 AFMP43652 599 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 METAP2P50579 478 aaKnown RBP eCLIP7.53□□□□□ -1.2
NR1I3-224ENST00000507215 CLCN4P51793 760 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 NLRP11P59045 1033 aaKnown RBP7.53□□□□□ -1.2
NR1I3-224ENST00000507215 AMPD2Q01433 879 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 RNASELQ05823 741 aaKnown RBP7.53□□□□□ -1.2
NR1I3-224ENST00000507215 DUSP4Q13115 394 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 PTPN14Q15678 1187 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 CLLU1OSQ5K130 101 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 GTF2IRD2BQ6EKJ0 949 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 GTF2IRD2Q86UP8 949 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 SMC5Q8IY18 1101 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 URGCPQ8TCY9 931 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 IGDCC4Q8TDY8 1250 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 BTN2A2Q8WVV5 523 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
NR1I3-224ENST00000507215 PGBD4Q96DM1 585 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 KIRREL1Q96J84 757 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 SCLT1Q96NL6 688 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 LNPKQ9C0E8 428 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 RWDD1Q9H446 243 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-224ENST00000507215 PLEKHA4Q9H4M7 779 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 TBC1D17Q9HA65 648 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 RIC8AQ9NPQ8 531 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 ARHGEF3Q9NR81 526 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 MRPL17Q9NRX2 175 aaKnown RBP7.53□□□□□ -1.2
NR1I3-224ENST00000507215 NRBP2Q9NSY0 501 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 PCDHA10Q9Y5I2 948 aa7.53□□□□□ -1.2
NR1I3-224ENST00000507215 CNTNAP2Q9UHC6 1331 aa7.52□□□□□ -1.2
NR1I3-224ENST00000507215 CHD6Q8TD26 2715 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 IPO5O00410 1097 aaKnown RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 NCAM2O15394 837 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 TBC1D4O60343 1298 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ZNF623O75123 536 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 URODP06132 367 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CYP21A2P08686 494 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 MCM5P33992 734 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 NOP2P46087 812 aaKnown RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 DNM2P50570 870 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 STARD6P59095 220 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 PFKPQ01813 784 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CREMQ03060 361 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ITGB3BPQ13352 177 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 NR0B2Q15466 257 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 NOMO2Q5JPE7 1267 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 SWSAP1Q6NVH7 229 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 SYNE3Q6ZMZ3 975 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CEP128Q6ZU80 1094 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 SPATC1Q76KD6 591 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 HEATR3Q7Z4Q2 680 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 SLCO6A1Q86UG4 719 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ZNF410Q86VK4 478 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CHD1LQ86WJ1 897 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ZSWIM9Q86XI8 627 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CCDC60Q8IWA6 550 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 EXOC8Q8IYI6 725 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 SLC44A3Q8N4M1 653 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 C12orf76Q8N812 135 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ANKS4BQ8N8V4 417 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 RNF169Q8NCN4 708 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 PJA1Q8NG27 643 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ABHD4Q8TB40 342 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ATRIPQ8WXE1 791 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 PIBF1Q8WXW3 757 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 FAM168AQ92567 244 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 PHKBQ93100 1093 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ZBTB10Q96DT7 871 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CCDC120Q96HB5 630 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 DRC1Q96MC2 740 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 FAM193BQ96PV7 902 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 JMJD8Q96S16 334 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 NELL2Q99435 816 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 JPH2Q9BR39 696 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 TMEM175Q9BSA9 504 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 GCOM2Q9BZD3 368 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 RNF32Q9H0A6 362 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 SMOC2Q9H3U7 446 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 UBN1Q9NPG3 1134 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 RBM28Q9NW13 759 aaKnown RBP7.52□□□□□ -1.21
NR1I3-224ENST00000507215 ZDHHC7Q9NXF8 308 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 R4GN57 208 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 FAM208BQ5VWN6 2430 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 GPR179Q6PRD1 2367 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CLUHO75153 1309 aa7.52□□□□□ -1.21
NR1I3-224ENST00000507215 CACNA1IQ9P0X4 2223 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 MAP1BP46821 2468 aaKnown RBP7.51□□□□□ -1.21
NR1I3-224ENST00000507215 A0A1W2PQU0 124 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 E7EWF7 191 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 ARNTLO00327 626 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 LAMTOR5O43504 91 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 LRP3O75074 770 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 CCNE2O96020 404 aa7.51□□□□□ -1.21
NR1I3-224ENST00000507215 GLUD1P00367 558 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms