RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 PCDHA3Q9Y5H8 950 aa13.31□□□□□ -0.28
SIL1-209ENST00000507002 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 E5RJQ4 531 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 F8W810 466 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
SIL1-209ENST00000507002 KRT3P12035 628 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 CAPN2P17655 700 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 TYMPP19971 482 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 OR1G1P47890 313 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 PEX5P50542 639 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 SNX16P57768 344 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 RNASE9P60153 205 aaKnown RBP13.3□□□□□ -0.28
SIL1-209ENST00000507002 OGDHQ02218 1023 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 PMF1Q6P1K2 205 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 SPATA4Q8NEY3 305 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 ACTRT1Q8TDG2 376 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 RTP3Q9BQQ7 232 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 MED10Q9BTT4 135 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 NRDE2Q9H7Z3 1164 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
SIL1-209ENST00000507002 PRG3Q9Y2Y8 225 aaPredicted RBP13.3□□□□□ -0.28
SIL1-209ENST00000507002 NLRC5Q86WI3 1866 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 DNAH12Q6ZR08 3092 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 PIK3R2O00459 728 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 CLDN5O00501 218 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 CAPN15O75808 1086 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 RFC1P35251 1148 aaPredicted RBP13.29□□□□□ -0.28
SIL1-209ENST00000507002 PLCB3Q01970 1234 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 ZNF211Q13398 564 aaPredicted RBP13.29□□□□□ -0.28
SIL1-209ENST00000507002 FAM102AQ5T9C2 384 aaPredicted RBP13.29□□□□□ -0.28
SIL1-209ENST00000507002 OVOS1Q6IE37 1185 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 PAQR9Q6ZVX9 377 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 JOSD2Q8TAC2 188 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 RNPC3Q96LT9 517 aaKnown RBP13.29□□□□□ -0.28
SIL1-209ENST00000507002 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.281e-7■□□□□ 8.4
SIL1-209ENST00000507002 DUSP16Q9BY84 665 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 MRPL9Q9BYD2 267 aaKnown RBP13.29□□□□□ -0.28
SIL1-209ENST00000507002 B3GNT5Q9BYG0 378 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 CYLDQ9NQC7 956 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 TTC7AQ9ULT0 858 aaPredicted RBP13.29□□□□□ -0.28
SIL1-209ENST00000507002 USTQ9Y2C2 406 aa13.29□□□□□ -0.28
SIL1-209ENST00000507002 PATJQ8NI35 1801 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 XPO1O14980 1071 aaKnown RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 PSTPIP1O43586 416 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 GABBR2O75899 941 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 NPR3P17342 541 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 PSMA2P25787 234 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 ACADSBP45954 432 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 PLA2G4AP47712 749 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 RPL34P49207 117 aaKnown RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 RWDD2BP57060 319 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 SLC8A3P57103 927 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 TAS2R40P59535 323 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 IKBKEQ14164 716 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 PIGHQ14442 188 aaPredicted RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 INTS6LQ5JSJ4 861 aaKnown RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 SEL1L2Q5TEA6 688 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 DAB2IPQ5VWQ8 1189 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.28□□□□□ -0.284e-6■■■□□ 19.2
SIL1-209ENST00000507002 FAM35AQ86V20 835 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 THEM5Q8N1Q8 247 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 MMGT1Q8N4V1 131 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 GPR161Q8N6U8 529 aaKnown RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 NIPA2Q8N8Q9 360 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 MYCBPAPQ8TBZ2 947 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 FNIP1Q8TF40 1166 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 VWCEQ96DN2 955 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 HSFY1Q96LI6 401 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 COLEC11Q9BWP8 271 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 PRDM5Q9NQX1 630 aaPredicted RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 RBM12Q9NTZ6 932 aaKnown RBP13.28□□□□□ -0.28
SIL1-209ENST00000507002 ALPK3Q96L96 1907 aa13.28□□□□□ -0.28
SIL1-209ENST00000507002 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 NRP1O14786 923 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 PAPSS1O43252 624 aaPredicted RBP13.27□□□□□ -0.29
SIL1-209ENST00000507002 TRAPPC3O43617 180 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 TADA2AO75478 443 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 TIMP1P01033 207 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 FGGP02679 453 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 FAM200BP0CF97 657 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.29
SIL1-209ENST00000507002 SLC11A1P49279 550 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 SLC6A3Q01959 620 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 AADACL2Q6P093 401 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 CC2D1AQ6P1N0 951 aaPredicted RBP13.27□□□□□ -0.29
SIL1-209ENST00000507002 FAM171BQ6P995 826 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 OLFML1Q6UWY5 402 aa13.27□□□□□ -0.29
SIL1-209ENST00000507002 PIGZQ86VD9 579 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms