RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 CLCNKBP51801 687 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 GUCY2FP51841 1108 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 RBM10P98175 930 aaKnown RBP10.28□□□□□ -0.76
CLCN3-205ENST00000506924 HYAL1Q12794 435 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 ALCAMQ13740 583 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 POSTNQ15063 836 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 TIGD5Q53EQ6 642 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 ISM2Q6H9L7 571 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 SLFN12LQ6IEE8 588 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 ARMCX5Q6P1M9 558 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 STXBP4Q6ZWJ1 553 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 KIAA0895Q8NCT3 520 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 PHC3Q8NDX5 983 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 ZNF507Q8TCN5 953 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 SCFD1Q8WVM8 642 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 RSPH1Q8WYR4 309 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 TMEM74Q96NL1 305 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 COLEC11Q9BWP8 271 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 LMAN2LQ9H0V9 348 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 CCDC86Q9H6F5 360 aaKnown RBP10.28□□□□□ -0.76
CLCN3-205ENST00000506924 TMEM206Q9H813 350 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 TUBGCP4Q9UGJ1 667 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 CPSF3Q9UKF6 684 aaKnown RBP10.28□□□□□ -0.76
CLCN3-205ENST00000506924 STYXL1Q9Y6J8 313 aa10.28□□□□□ -0.76
CLCN3-205ENST00000506924 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.76
CLCN3-205ENST00000506924 TTC26A0AVF1 554 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 I3L4J1 428 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 EIF3DO15371 548 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLCN3-205ENST00000506924 TGFB1I1O43294 461 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 TIAF1O95411 115 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 ECEL1O95672 775 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 GATA4P43694 442 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 CYP2J2P51589 502 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 TFF2Q03403 129 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 UBE3AQ05086 875 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-205ENST00000506924 XKR4Q5GH76 650 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 JADE1Q6IE81 842 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 FDX2Q6P4F2 183 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 CRELD2Q6UXH1 353 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-205ENST00000506924 DDX53Q86TM3 631 aaKnown RBP10.27□□□□□ -0.77
CLCN3-205ENST00000506924 TRIM42Q8IWZ5 723 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-205ENST00000506924 FAM84AQ96KN4 292 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 GPR62Q9BZJ7 368 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 TLE6Q9H808 572 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 GGT7Q9UJ14 662 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 LZTS1Q9Y250 596 aa10.27□□□□□ -0.77
CLCN3-205ENST00000506924 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-205ENST00000506924 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 PODXLO00592 558 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 KINO60870 393 aaKnown RBP10.26□□□□□ -0.77
CLCN3-205ENST00000506924 B3GAT3O94766 335 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 IGHA1P01876 353 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 MYL1P05976 194 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 NFICP08651 508 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 KCNE1P15382 129 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 GARTP22102 1010 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 BRCC3P46736 316 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 LMNB2Q03252 620 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
CLCN3-205ENST00000506924 CLUL1Q15846 466 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 KYAT1Q16773 422 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 FUT10Q6P4F1 479 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 CEP57Q86XR8 500 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 CCDC47Q96A33 483 aaKnown RBP10.26□□□□□ -0.77
CLCN3-205ENST00000506924 RHOVQ96L33 236 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-205ENST00000506924 ZBP1Q9H171 429 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 AGPAT3Q9NRZ7 376 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 CLDND1Q9NY35 253 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 HSPBP1Q9NZL4 362 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 ADAM28Q9UKQ2 775 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 HIF3AQ9Y2N7 669 aa10.26□□□□□ -0.77
CLCN3-205ENST00000506924 PDCD11Q14690 1871 aaKnown RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 SPTBN5Q9NRC6 3674 aaKnown RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 H3BQ06 376 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 PPEF2O14830 753 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 EXTL3O43909 919 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 RHOBTB3O94955 611 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 SOD2P04179 222 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 ITGB2P05107 769 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 CTSAP10619 480 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 RPL17P18621 184 aaKnown RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 KCNA5P22460 613 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 UBE2HP62256 183 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 DLX2Q07687 328 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 CAMK4Q16566 473 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 UPP1Q16831 310 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 KNOP1Q1ED39 458 aaKnown RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 FAM171A1Q5VUB5 890 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 LMBRD2Q68DH5 695 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 KIAA1841Q6NSI8 718 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 PRSS55Q6UWB4 352 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 CD300LGQ6UXG3 332 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 GPD1LQ8N335 351 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 MRPL43Q8N983 215 aaKnown RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 CCDC34Q96HJ3 373 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms