RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 ZNF286BP0CG31 522 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 KCNA3P22001 575 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 BCAR1P56945 870 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 AP1B1Q10567 949 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 MOXD1Q6UVY6 613 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ARMC9Q7Z3E5 817 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ZNF572Q7Z3I7 529 aaPredicted RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 FAM131BQ86XD5 332 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 SPATA6LQ8N4H0 392 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 MSL3Q8N5Y2 521 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 TLCD1Q96CP7 247 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 PIWIL1Q96J94 861 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 TBC1D10AQ9BXI6 508 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 PDGFCQ9NRA1 345 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 KLRG2A4D1S0 409 aaPredicted RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 KCNK1O00180 336 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 TRPA1O75762 1119 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 PDE5AO76074 875 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 TAC1P20366 129 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 GPC3P51654 580 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ARL4CP56559 192 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 SLC20A2Q08357 652 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ANKRD20A2Q5SQ80 823 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 THEMIS2Q5TEJ8 643 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ANKRD20A1Q5TYW2 823 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 NDUFAF2Q8N183 169 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 TSSK1BQ9BXA7 367 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 RPF1Q9H9Y2 349 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 TMPRSS4Q9NRS4 437 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 GPRC5DQ9NZD1 345 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 PCYOX1Q9UHG3 505 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 BTAF1O14981 1849 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 CAPN9O14815 690 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 EXTL3O43909 919 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 KRT36O76013 467 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 HAUS5O94927 633 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 CELF2O95319 508 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 GLRBP48167 497 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 RASIP1Q5U651 963 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 CAPRIN2Q6IMN6 1127 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 EFCAB12Q6NXP0 572 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 C6orf89Q6UWU4 347 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 PCGF5Q86SE9 256 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 APOBEC3FQ8IUX4 373 aaKnown RBP10.04□□□□□ -0.8
PHF3-208ENST00000506783 SNX31Q8N9S9 440 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 ANKRD36BP1Q96IX9 119 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 CLMNQ96JQ2 1002 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 NRBP2Q9NSY0 501 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 NUDT5Q9UKK9 219 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 LYPLA1O75608 230 aaPredicted RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 EDN1P05305 212 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 TPH1P17752 444 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 AKAP5P24588 427 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 IL1R2P27930 398 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 BTKQ06187 659 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 KPNB1Q14974 876 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 CHI3L2Q15782 390 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 XKR3Q5GH77 459 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 OTOAQ7RTW8 1153 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 MAP4K3Q8IVH8 894 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 PIP4K2CQ8TBX8 421 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 SLC26A7Q8TE54 656 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 PSPC1Q8WXF1 523 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 ZNF75CPQ92670 426 aaPredicted RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 EXT2Q93063 718 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 CPXM1Q96SM3 734 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 TRIM55Q9BYV6 548 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 SIK2Q9H0K1 926 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 IP6K2Q9UHH9 426 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 MAP1BP46821 2468 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 NCANO14594 1321 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 A0A087WZ62 844 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 GRIN3BO60391 1043 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 VNN1O95497 513 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 MIPP30301 263 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 GNL1P36915 607 aaPredicted RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 RPL10AP62906 217 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 NOMO3P69849 1222 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 MGAT5Q09328 741 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 C4orf19Q8IY42 314 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 C7orf43Q8WVR3 580 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 CRYGNQ8WXF5 182 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 SERPINB12Q96P63 405 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 FDXACB1Q9BRP7 624 aaPredicted RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 ACAD9Q9H845 621 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 SLC38A10Q9HBR0 1119 aa10.03□□□□□ -0.8
PHF3-208ENST00000506783 ZC3H7BQ9UGR2 993 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 DIS3Q9Y2L1 958 aaKnown RBP10.03□□□□□ -0.8
PHF3-208ENST00000506783 NFICP08651 508 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms