RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 MT-ND5P03915 603 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 ZKSCAN1P17029 563 aaPredicted RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 PRIM2P49643 509 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 ALDH5A1P51649 535 aaPredicted RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 MAPK10P53779 464 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 ATXN1P54253 815 aaKnown RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 TGFB2P61812 414 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 SIM1P81133 766 aaPredicted RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 MRPS35P82673 323 aaKnown RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 SP2Q02086 613 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 E2F2Q14209 437 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 NPY5RQ15761 445 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 ARHGAP40Q5TG30 622 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 FCRL6Q6DN72 434 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 RGS7BPQ6MZT1 257 aaPredicted RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 MAVSQ7Z434 540 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 CCAR1Q8IX12 1150 aaKnown RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 TOR1AIP2Q8NFQ8 470 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 SVIPQ8NHG7 77 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 BPIFB1Q8TDL5 484 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 ATG4AQ8WYN0 398 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 RAPGEF4Q8WZA2 1011 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 SLC39A13Q96H72 371 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 PPP1R9BQ96SB3 815 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 ZNF700Q9H0M5 742 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 SYNPO2LQ9H987 977 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 PNPLA8Q9NP80 782 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 CHST12Q9NRB3 414 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 CORO2BQ9UQ03 480 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 MRPS17Q9Y2R5 130 aaKnown RBP3.55□□□□□ -1.84
GYPB-207ENST00000506679 CDY1Q9Y6F8 540 aa3.55□□□□□ -1.84
GYPB-207ENST00000506679 FER1L4A9Z1Z3 1794 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 CCDC194A0A1B0GVG4 234 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 A0A1W2PPC4 97 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 CCDC151A5D8V7 595 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ZAR1LA6NP61 321 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 CLCA1A8K7I4 914 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 RASA4BC9J798 803 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 KPNA5O15131 536 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 RASA4O43374 803 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 RRP9O43818 475 aaKnown RBP3.54□□□□□ -1.84
GYPB-207ENST00000506679 TLR5O60602 858 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ANXA2P07355 339 aaKnown RBP3.54□□□□□ -1.84
GYPB-207ENST00000506679 PDHA1P08559 390 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ELFN1P0C7U0 828 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ACVR2AP27037 513 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 GRIA3P42263 894 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 CARSP49589 748 aaKnown RBP3.54□□□□□ -1.84
GYPB-207ENST00000506679 RARRES1P49788 294 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 PDE6CP51160 858 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 SATB1Q01826 763 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 KRT17Q04695 432 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 IFIT5Q13325 482 aaKnown RBP3.54□□□□□ -1.84
GYPB-207ENST00000506679 ARHGEF7Q14155 803 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 INSCQ1MX18 579 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ZNF750Q32MQ0 723 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 PRR16Q569H4 304 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ZNF618Q5T7W0 954 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 TEDDM1Q5T9Z0 273 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 UNC13DQ70J99 1090 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 PEG10Q86TG7 708 aaKnown RBP3.54□□□□□ -1.84
GYPB-207ENST00000506679 CCDC146Q8IYE0 955 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 GPR150Q8NGU9 434 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 ACTRT2Q8TDY3 377 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 TFAP2BQ92481 460 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 FKBP10Q96AY3 582 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 FBXL20Q96IG2 436 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 SNX22Q96L94 193 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 TRIM5Q9C035 493 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 EHD3Q9NZN3 535 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 DKK3Q9UBP4 350 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 DKK4Q9UBT3 224 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 MID2Q9UJV3 735 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 SERTAD3Q9UJW9 196 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 PHTF1Q9UMS5 762 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 SH2B3Q9UQQ2 575 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 TBC1D30Q9Y2I9 924 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 SNX13Q9Y5W8 968 aa3.54□□□□□ -1.84
GYPB-207ENST00000506679 A0A087WZ62 844 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 POM121BA6NF01 834 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 H7C4K7 107 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 SLC16A3O15427 465 aaKnown RBP3.53□□□□□ -1.84
GYPB-207ENST00000506679 NXPH3O95157 252 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 LMNAP02545 664 aaKnown RBP3.53□□□□□ -1.84
GYPB-207ENST00000506679 A1BGP04217 495 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 ERBB2P04626 1255 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 CHRM2P08172 466 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 PARP1P09874 1014 aaKnown RBP3.53□□□□□ -1.84
GYPB-207ENST00000506679 BTF3P20290 206 aaKnown RBP3.53□□□□□ -1.84
GYPB-207ENST00000506679 IL1R2P27930 398 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 LIPAP38571 399 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 FSTL1Q12841 308 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 TBCCQ15814 346 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 PTCHD3Q3KNS1 767 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 KAZNQ674X7 775 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 IL31Q6EBC2 164 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 OLFML1Q6UWY5 402 aa3.53□□□□□ -1.84
GYPB-207ENST00000506679 NOL8Q76FK4 1167 aaKnown RBP3.53□□□□□ -1.84
GYPB-207ENST00000506679 KCTD20Q7Z5Y7 419 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms