RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 NPPBP16860 134 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 EGR1P18146 543 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 GCSHP23434 173 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ATICP31939 592 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 KCNC1P48547 511 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 PTDSS1P48651 473 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 CHN2P52757 468 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 LINC00310P59036 64 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 KRT17Q04695 432 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZNF844Q08AG5 666 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SURF1Q15526 300 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 VMACQ2NL98 169 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ADCK5Q3MIX3 580 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 NOMO2Q5JPE7 1267 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 FBXO47Q5MNV8 452 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 INTS11Q5TA45 600 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 FAXCQ5TGI0 409 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SPTY2D1Q68D10 685 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 FCRL6Q6DN72 434 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SULT6B1Q6IMI4 303 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 MRNIPQ6NTE8 343 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 MZT2AQ6P582 158 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 LAYNQ6UX15 382 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 PCGF5Q86SE9 256 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 CCDC117Q8IWD4 279 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SUGP1Q8IWZ8 645 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZFPM1Q8IX07 1006 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 COLGALT2Q8IYK4 626 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 MDGA1Q8NFP4 955 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 OR52N2Q8NGI0 321 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 STT3BQ8TCJ2 826 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 OTUD7AQ8TE49 926 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 TMEM176AQ96HP8 235 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 PHACTR3Q96KR7 559 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLC46A1Q96NT5 459 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 LRRC37BQ96QE4 947 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 TRIB1Q96RU8 372 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 PNKPQ96T60 521 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 MPHOSPH9Q99550 1183 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 PLA2G12BQ9BX93 195 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 TTYH3Q9C0H2 523 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SAYSD1Q9NPB0 183 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 CD320Q9NPF0 282 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ETAA1Q9NY74 926 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 PLA2G3Q9NZ20 509 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 TMOD4Q9NZQ9 345 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 KIF17Q9P2E2 1029 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 FBXO9Q9UK97 447 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 GJD2Q9UKL4 321 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 CA14Q9ULX7 337 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 SCAF8Q9UPN6 1271 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 CDYLQ9Y232 598 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ATP11BQ9Y2G3 1177 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 TBC1D30Q9Y2I9 924 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 RAD54BQ9Y620 910 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 KIF21BO75037 1637 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 PRXQ9BXM0 1461 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CD109Q6YHK3 1445 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CCDC195A0A1B0GUA6 201 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 J3KRW8 73 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 ASNA1O43681 348 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 NOBOXO60393 691 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SOAT2O75908 522 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 PIAS2O75928 621 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 PRSS23O95084 383 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 GLP2RO95838 553 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 FCER1AP12319 257 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 LRPAP1P30533 357 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MAN1A1P33908 653 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 GCLCP48506 637 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLFN5Q08AF3 891 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 NSUN2Q08J23 767 aaKnown RBP eCLIP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 ELAVL1Q15717 326 aaKnown RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 KCNA10Q16322 511 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CSRP2Q16527 193 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLC5A9Q2M3M2 681 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 TRIM71Q2Q1W2 868 aaKnown RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZNF750Q32MQ0 723 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 TMTC4Q5T4D3 741 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CACHD1Q5VU97 1274 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 TCERG1LQ5VWI1 586 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 RAP1GAP2Q684P5 730 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 TAPT1Q6NXT6 567 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLC30A10Q6XR72 485 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MOGAT3Q86VF5 341 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 TAX1BP1Q86VP1 789 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SIAH1Q8IUQ4 282 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CCDC28AQ8IWP9 274 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 FTSJ3Q8IY81 847 aaKnown RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 ELOA2Q8IYF1 753 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 PSD4Q8NDX1 1056 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 BHLHE22Q8NFJ8 381 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SPPL3Q8TCT6 385 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 SKA1Q96BD8 255 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MARS2Q96GW9 593 aaKnown RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 TLR10Q9BXR5 811 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 HELLSQ9NRZ9 838 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MRPS18AQ9NVS2 196 aaKnown RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MAP3K20Q9NYL2 800 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms