RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TRAV19A0A0A6YYK7 116 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 SLC38A8A6NNN8 435 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 SPECC1L-ADORA2AF8WAN1 911 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 ARNTLO00327 626 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 PDXKO00764 312 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-222ENST00000506018 STAU1O95793 577 aaKnown RBP11.13□□□□□ -0.63
NR1I3-222ENST00000506018 F11P03951 625 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 USP17L7P0C7H9 530 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 HMGA1P17096 107 aaKnown RBP11.13□□□□□ -0.63
NR1I3-222ENST00000506018 PSMC1P62191 440 aaKnown RBP11.13□□□□□ -0.63
NR1I3-222ENST00000506018 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-222ENST00000506018 ITPRIPL2Q3MIP1 535 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 KMT5BQ4FZB7 885 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 FAM171BQ6P995 826 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 MON1AQ86VX9 555 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 GRAMD1CQ8IYS0 662 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 MYLPFQ96A32 169 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 SLC46A2Q9BY10 475 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 ZSCAN32Q9NX65 697 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 ATP8B3O60423 1300 aa11.13□□□□□ -0.63
NR1I3-222ENST00000506018 A8MXQ7 604 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 PRAMEF12O95522 483 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 CST3P01034 146 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-222ENST00000506018 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
NR1I3-222ENST00000506018 CKMP06732 381 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 PFKLP17858 780 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 CTHP32929 405 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 PPP3CCP48454 512 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 GPR15P49685 360 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 FAM160A1Q05DH4 1040 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 STK4Q13043 487 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 MTAPQ13126 283 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 KCNB1Q14721 858 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 ZNF699Q32M78 642 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 ZNF667Q5HYK9 610 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 TXNDC8Q6A555 127 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 SYNPOQ8N3V7 929 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 TMEM174Q8WUU8 243 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 RSPRY1Q96DX4 576 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 FAM84AQ96KN4 292 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-222ENST00000506018 GTSE1Q9NYZ3 720 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
NR1I3-222ENST00000506018 RAB23Q9ULC3 237 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
NR1I3-222ENST00000506018 NCANO14594 1321 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 KLRC4O43908 158 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 ATP2C2O75185 946 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 NR3C1P04150 777 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 CHRNB1P11230 501 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 BDNFP23560 247 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 LMO2P25791 158 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
NR1I3-222ENST00000506018 CXCL12P48061 93 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 MYL6P60660 151 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 FZD5Q13467 585 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 PDGFRLQ15198 375 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 MDH1BQ5I0G3 518 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 CEP135Q66GS9 1140 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 TMEM150AQ86TG1 271 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-222ENST00000506018 SPEM1Q8N4L4 309 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 CPA6Q8N4T0 437 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 KIAA0895Q8NCT3 520 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 RUBCNQ92622 972 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-222ENST00000506018 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 TNIP3Q96KP6 325 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 SLITRK1Q96PX8 696 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
NR1I3-222ENST00000506018 IMPG2Q9BZV3 1241 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 SMG9Q9H0W8 520 aaKnown RBP11.11□□□□□ -0.63
NR1I3-222ENST00000506018 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 CRTAC1Q9NQ79 661 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 GKN1Q9NS71 199 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 TRPM5Q9NZQ8 1165 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 NCDNQ9UBB6 729 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 VPS13AQ96RL7 3174 aa11.11□□□□□ -0.63
NR1I3-222ENST00000506018 IKBKBO14920 756 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 MAPK13O15264 365 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms