RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 DEFB123Q8N688 67 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 ANKRD52Q8NB46 1076 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 EXD1Q8NHP7 514 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 UBA3Q8TBC4 463 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 HDAC7Q8WUI4 952 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 SLC35F5Q8WV83 523 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 KBTBD7Q8WVZ9 684 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 SENP8Q96LD8 212 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 HSFY1Q96LI6 401 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 UROC1Q96N76 676 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 ADAM2Q99965 735 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 NCAPGQ9BPX3 1015 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 FUT8Q9BYC5 575 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 TRIM7Q9C029 511 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 UBE2OQ9C0C9 1292 aaKnown RBP8.49□□□□□ -1.05
COL4A5-208ENST00000505728 RSAD1Q9HA92 442 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 RGS18Q9NS28 235 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 HOMER3Q9NSC5 361 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 ASNSD1Q9NWL6 643 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 DDX56Q9NY93 547 aaKnown RBP8.49□□□□□ -1.05
COL4A5-208ENST00000505728 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
COL4A5-208ENST00000505728 SPTBN5Q9NRC6 3674 aaKnown RBP8.49□□□□□ -1.05
COL4A5-208ENST00000505728 TDRD15B5MCY1 1934 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 ARHGEF37A1IGU5 675 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 MEIS3P2A8K0S8 358 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 GOLGA8SH3BPF8 625 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 DNM1LO00429 736 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 PHF2O75151 1096 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 SEC31AO94979 1220 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 GJB6O95452 261 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 GLI1P08151 1106 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 PDGFRBP09619 1106 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 FGFR1P11362 822 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 PSMA2P25787 234 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 RFC1P35251 1148 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 MLH1P40692 756 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 SSR1P43307 286 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 FNTAP49354 379 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 SCNN1GP51170 649 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 BCAT1P54687 386 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 EPHB4P54760 987 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 DRG2P55039 364 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 TAS2R40P59535 323 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 FAM189BP81408 668 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 GUCY2DQ02846 1103 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 BST2Q10589 180 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 GRIK3Q13003 919 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 NNTQ13423 1086 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 CUL1Q13616 776 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 HADHQ16836 314 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 OR6B2Q6IFH4 312 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 EMBQ6PCB8 327 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 DSTYKQ6XUX3 929 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 POLNQ7Z5Q5 900 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 ZNF598Q86UK7 904 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 OSTM1Q86WC4 334 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 C12orf29Q8N999 325 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 C12orf50Q8NA57 414 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 AENQ8WTP8 325 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 LPPQ93052 612 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 MAGOHBQ96A72 148 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 RBM41Q96IZ5 413 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 MCEEQ96PE7 176 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 HNRNPABQ99729 332 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 FTHL17Q9BXU8 183 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 OSBPL7Q9BZF2 842 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 DDX47Q9H0S4 455 aaKnown RBP8.48□□□□□ -1.05
COL4A5-208ENST00000505728 RAB17Q9H0T7 212 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 TRPV6Q9H1D0 765 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 LRRC19Q9H756 370 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 GOLGA2P5Q9HBQ8 144 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 EPB41L5Q9HCM4 733 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 FAM114A2Q9NRY5 505 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 RNF19AQ9NV58 838 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 PCYOX1Q9UHG3 505 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 NME7Q9Y5B8 376 aa8.48□□□□□ -1.05
COL4A5-208ENST00000505728 C9IYK1 514 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 F8VP50 259 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 DLL1O00548 723 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 ZMYND10O75800 440 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 RNF8O76064 485 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 KRT7P08729 469 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 RARAP10276 462 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 SELPP16109 830 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 DESP17661 470 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 PTPN1P18031 435 aaKnown RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 LMO2P25791 158 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 PTPN7P35236 360 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 PCK1P35558 622 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 COILP38432 576 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 SLC6A3Q01959 620 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 OGDHQ02218 1023 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 PDE4CQ08493 712 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms