RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 ALLCQ8N6M5 410 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 F8VP50 259 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 PIRO00625 290 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 LRCH4O75427 683 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 IRAK1P51617 712 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 PURAQ00577 322 aaKnown RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 PHLDB2Q86SQ0 1253 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 CENPTQ96BT3 561 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 HSFY1Q96LI6 401 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 SERPINB12Q96P63 405 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 SNX25Q9H3E2 840 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 ZNF148Q9UQR1 794 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 TRPV2Q9Y5S1 764 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 LRPAP1P30533 357 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 KCNJ1P48048 391 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 TMEM110Q86TL2 294 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 ZCCHC9Q8N567 271 aaKnown RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 CMASQ8NFW8 434 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 DNAJB3Q8WWF6 145 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 TWNKQ96RR1 684 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 DNALI1O14645 258 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 RGS16O15492 202 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 ADCY6O43306 1168 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 KLRC2P26717 231 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 FLT3P36888 993 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 MDH1P40925 334 aaKnown RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 OGDHQ02218 1023 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 SNX1Q13596 522 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 LLGL2Q6P1M3 1020 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 SAPCD2Q86UD0 394 aa11.9□□□□□ -0.5
NFKB1-205ENST00000505458 FRMD8Q9BZ67 464 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-205ENST00000505458 APOC4-APOC2K7ER74 178 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 CSDE1O75534 798 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 APOC2P02655 101 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 CYP2B6P20813 491 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 KDELR1P24390 212 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 IVDP26440 423 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 RAB27AP51159 221 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 MRPS6P82932 125 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 PKDCCQ504Y2 493 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 IZUMO3Q5VZ72 239 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 LIMS2Q7Z4I7 341 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 APPL2Q8NEU8 664 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 SLC35B2Q8TB61 432 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 HEMGNQ9BXL5 484 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 ERICH4A6NGS2 130 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 C2CD4BA6NLJ0 364 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 CA12O43570 354 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 HUS1O60921 280 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 TSHRP16473 764 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 WARSP23381 471 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 RPL34P49207 117 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 ITGA8P53708 1063 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 NR1H3Q13133 447 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 STAT4Q14765 748 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 OASLQ15646 514 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 HIBCHQ6NVY1 386 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 MICALCLQ6ZW33 695 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 B4GALNT4Q76KP1 1039 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 CENPHQ9H3R5 247 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 GINS2Q9Y248 185 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 SCN10AQ9Y5Y9 1956 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 KPNA7A9QM74 516 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 MCF2LO15068 1137 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 TTC4O95801 387 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 ZFXP17010 805 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 SDC4P31431 198 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 PTPN9P43378 593 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 SLC6A3Q01959 620 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 ANKRD52Q8NB46 1076 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 KCTD6Q8NC69 237 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 ATG4AQ8WYN0 398 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 CFAP57Q96MR6 1250 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 MAK16Q9BXY0 300 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 FLRT1Q9NZU1 646 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 CYTH4Q9UIA0 394 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
NFKB1-205ENST00000505458 USP18Q9UMW8 372 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
NFKB1-205ENST00000505458 SMIM28A0A1B0GU29 152 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 FAM170AA1A519 330 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 A8MXQ7 604 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 STIP1P31948 543 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 TM4SF4P48230 202 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 PPP1R21Q6ZMI0 780 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms