RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TPD52L1Q16890 204 aaPredicted RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CCDC142Q17RM4 750 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CTXN3Q4LDR2 81 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 GPR149Q86SP6 731 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 METTL23Q86XA0 190 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PHF13Q86YI8 300 aaPredicted RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 ELMO3Q96BJ8 720 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 INSL5Q9Y5Q6 135 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CDY1Q9Y6F8 540 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 RFXAPO00287 272 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 TRIM66O15016 1216 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 BEST1O76090 585 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 WEE2P0C1S8 567 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PLD1Q13393 1074 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 IRGQQ8WZA9 623 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PPP1R9BQ96SB3 815 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 SFXN1Q9H9B4 322 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 ABHD10Q9NUJ1 306 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CFHP08603 1231 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 NOMO3P69849 1222 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 LEMD2Q8NC56 503 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 SMARCD1Q96GM5 515 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 IMPG2Q9BZV3 1241 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PRDM12Q9H4Q4 367 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 SCML2Q9UQR0 700 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CLUHO75153 1309 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 GOLGA6L19H0YKK7 550 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 GREM1O60565 184 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 F11P03951 625 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 HADHBP55084 474 aaKnown RBP8.79□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF268Q14587 947 aaPredicted RBP8.79□□□□□ -1
CDC42SE2-208ENST00000505065 KLHDC10Q6PID8 442 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 C4orf50Q6ZRC1 276 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 MON1BQ7L1V2 547 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 RRAGAQ7L523 313 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 SLC47A2Q86VL8 602 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 CCDC150Q8NCX0 1101 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF606Q8WXB4 792 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 PCDHB18PQ96TA0 734 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 ADAM7Q9H2U9 754 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 BTNL10A8MVZ5 291 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 C7P10643 843 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 FERP16591 822 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 BPIFB4P59827 614 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 FILIP1LQ4L180 1135 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 TCERG1LQ5VWI1 586 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 TRIM72Q6ZMU5 477 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 TTC9BQ8N6N2 239 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 PRKD2Q9BZL6 878 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 YIPF1Q9Y548 306 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 PCDHB5Q9Y5E4 795 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 LRRC53A6NM62 1247 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 LINC01565O15544 149 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 PHACTR2O75167 634 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 MTA2O94776 668 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 IGLV3-27P01718 113 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 KRT19P08727 400 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 GZMAP12544 262 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 NPR3P17342 541 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 PPP3CCP48454 512 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 FAM217AQ8IXS0 508 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 NEK11Q8NG66 645 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 AUTS2Q8WXX7 1259 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 VCPIP1Q96JH7 1222 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 HSFY1Q96LI6 401 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 ARHGAP20Q9P2F6 1191 aa8.79□□□□□ -1
CDC42SE2-208ENST00000505065 BZW2Q9Y6E2 419 aaKnown RBP8.79□□□□□ -1
CDC42SE2-208ENST00000505065 ENDOD1O94919 500 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 TPM2P07951 284 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 EPCAMP16422 314 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 OR1D2P34982 312 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 STAT1P42224 750 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 CLEC16AQ2KHT3 1053 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 PLPP4Q5VZY2 271 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 MSANTD2Q6P1R3 559 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 FEZF2Q8TBJ5 459 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 MCRS1Q96EZ8 462 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 SLC2A13Q96QE2 648 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 CRACR2AQ9BSW2 395 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 EPS15L1Q9UBC2 864 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 TIMM13Q9Y5L4 95 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 ANHXE9PGG2 379 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 FGF19O95750 216 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 BCAT1P54687 386 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 ITIH3Q06033 890 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 BST2Q10589 180 aaKnown RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 HSP90AA4PQ58FG1 418 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 CCDC149Q6ZUS6 474 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF571Q7Z3V5 609 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 C12orf29Q8N999 325 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 PGAP3Q96FM1 320 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 ZFRQ96KR1 1074 aaKnown RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 DPP7Q9UHL4 492 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 STOML2Q9UJZ1 356 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 CHRM1P11229 460 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 FCARP24071 287 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms