RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 OGDHQ02218 1023 aa14□□□□□ -0.17
LMNA-220ENST00000504687 PDE4CQ08493 712 aa14□□□□□ -0.17
LMNA-220ENST00000504687 DHX34Q14147 1143 aaKnown RBP14□□□□□ -0.17
LMNA-220ENST00000504687 MAP9Q49MG5 647 aa14□□□□□ -0.17
LMNA-220ENST00000504687 NOMO2Q5JPE7 1267 aa14□□□□□ -0.17
LMNA-220ENST00000504687 CYP4A22Q5TCH4 519 aa14□□□□□ -0.17
LMNA-220ENST00000504687 WSCD1Q658N2 575 aa14□□□□□ -0.17
LMNA-220ENST00000504687 PMF1Q6P1K2 205 aa14□□□□□ -0.17
LMNA-220ENST00000504687 CC2D1AQ6P1N0 951 aaPredicted RBP14□□□□□ -0.17
LMNA-220ENST00000504687 FBXO46Q6PJ61 603 aaPredicted RBP14□□□□□ -0.17
LMNA-220ENST00000504687 TMCO3Q6UWJ1 677 aa14□□□□□ -0.17
LMNA-220ENST00000504687 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
LMNA-220ENST00000504687 CCNI2Q6ZMN8 369 aaPredicted RBP14□□□□□ -0.17
LMNA-220ENST00000504687 MAATS1Q7Z4T9 603 aa14□□□□□ -0.17
LMNA-220ENST00000504687 RCOR2Q8IZ40 523 aa14□□□□□ -0.17
LMNA-220ENST00000504687 C3orf58Q8NDZ4 430 aa14□□□□□ -0.17
LMNA-220ENST00000504687 CCDC26Q8TAB7 109 aa14□□□□□ -0.17
LMNA-220ENST00000504687 UBA3Q8TBC4 463 aa14□□□□□ -0.17
LMNA-220ENST00000504687 SLCO2A1Q92959 643 aa14□□□□□ -0.17
LMNA-220ENST00000504687 RBM41Q96IZ5 413 aaKnown RBP14□□□□□ -0.17
LMNA-220ENST00000504687 ZNF333Q96JL9 665 aa14□□□□□ -0.17
LMNA-220ENST00000504687 ACBD6Q9BR61 282 aa14□□□□□ -0.17
LMNA-220ENST00000504687 CNPY3Q9BT09 278 aa14□□□□□ -0.17
LMNA-220ENST00000504687 DUSP16Q9BY84 665 aa14□□□□□ -0.17
LMNA-220ENST00000504687 MCOLN1Q9GZU1 580 aa14□□□□□ -0.17
LMNA-220ENST00000504687 EPC1Q9H2F5 836 aa14□□□□□ -0.17
LMNA-220ENST00000504687 DPEP3Q9H4B8 488 aa14□□□□□ -0.17
LMNA-220ENST00000504687 SYNCQ9H7C4 482 aa14□□□□□ -0.17
LMNA-220ENST00000504687 HOMER3Q9NSC5 361 aa14□□□□□ -0.17
LMNA-220ENST00000504687 RNF19AQ9NV58 838 aa14□□□□□ -0.17
LMNA-220ENST00000504687 PCYOX1Q9UHG3 505 aa14□□□□□ -0.17
LMNA-220ENST00000504687 MTUS1Q9ULD2 1270 aa14□□□□□ -0.17
LMNA-220ENST00000504687 COL4A4P53420 1690 aaPredicted RBP14□□□□□ -0.17
LMNA-220ENST00000504687 FAM187AA6NFU0 413 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 C2CD4BA6NLJ0 364 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 E5RJQ4 531 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 ENPP3O14638 875 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 PHF2O75151 1096 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 KRT7P08729 469 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 CETN2P41208 172 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 SLC8A3P57103 927 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 TAS2R40P59535 323 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 SLC6A3Q01959 620 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 SIX1Q15475 284 aaPredicted RBP13.99□□□□□ -0.17
LMNA-220ENST00000504687 TAZQ16635 292 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 PTPROQ16827 1216 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 TIGD5Q53EQ6 642 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 CLLU1OSQ5K130 101 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
LMNA-220ENST00000504687 OLFML1Q6UWY5 402 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 DSTYKQ6XUX3 929 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 SLC26A9Q7LBE3 791 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 VSIG1Q86XK7 387 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 FUKQ8N0W3 1084 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 KRT12Q99456 494 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 LRRC19Q9H756 370 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 ASNSD1Q9NWL6 643 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 DDX43Q9NXZ2 648 aaKnown RBP13.99□□□□□ -0.17
LMNA-220ENST00000504687 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 DMGDHQ9UI17 866 aaKnown RBP13.99□□□□□ -0.17
LMNA-220ENST00000504687 PATJQ8NI35 1801 aa13.99□□□□□ -0.17
LMNA-220ENST00000504687 TTC3P53804 2025 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PTPRDP23468 1912 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 GABBR2O75899 941 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 POMCP01189 267 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 GLI1P08151 1106 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 NPR3P17342 541 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PSMA2P25787 234 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 RFC2P35250 354 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PTPN9P43378 593 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 FNTAP49354 379 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 DRG2P55039 364 aaKnown RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 SLC25A11Q02978 314 aaKnown RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 KLF1Q13351 362 aaPredicted RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 ZNF211Q13398 564 aaPredicted RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 MAPRE1Q15691 268 aaKnown RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 HADHQ16836 314 aaKnown RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 FAM102AQ5T9C2 384 aaPredicted RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 FAM171BQ6P995 826 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 FAM183BPQ6ZVS7 135 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PAQR9Q6ZVX9 377 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PHLDB2Q86SQ0 1253 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 METTL23Q86XA0 190 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 COLGALT2Q8IYK4 626 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 SCML4Q8N228 414 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PRELID2Q8N945 189 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 JOSD2Q8TAC2 188 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 SLC2A14Q8TDB8 520 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 KHSRPQ92945 711 aaKnown RBP eCLIP13.98□□□□□ -0.17
LMNA-220ENST00000504687 PKMYT1Q99640 499 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 SYT15Q9BQS2 421 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 METTL5Q9NRN9 209 aaKnown RBP13.98□□□□□ -0.17
LMNA-220ENST00000504687 FAM49BQ9NUQ9 324 aa13.98□□□□□ -0.17
LMNA-220ENST00000504687 PCDHB8Q9UN66 801 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms