RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 MIER2Q8N344 545 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 OR2C3Q8N628 320 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PPM1NQ8N819 430 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NKAIN3Q8N8D7 197 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZFP28Q8NHY6 868 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GOLGA1Q92805 767 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 USP13Q92995 863 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LTV1Q96GA3 475 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RIPOR3Q96MK2 946 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DCLRE1CQ96SD1 692 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TSPAN18Q96SJ8 248 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MAP3K14Q99558 947 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ACO2Q99798 780 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SENP6Q9GZR1 1112 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ALG13Q9NP73 1137 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGB6Q9Y5F9 930 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA9Q9Y5G4 932 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA8Q9Y5G5 932 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA7Q9Y5G6 932 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA6Q9Y5G7 932 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA3Q9Y5H0 932 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NPHP4O75161 1426 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZFYVE9O95405 1425 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SCAF11Q99590 1463 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CENPVL1A0A0U1RR11 272 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ANKRD18BA2A2Z9 1011 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RRN3P2A6NIE6 340 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GOLIM4O00461 696 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ABHD16AO95870 558 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HNRNPCP07910 306 aaKnown RBP eCLIP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MYBP10242 640 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LAG3P18627 525 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SMARCA1P28370 1054 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCSK1P29120 753 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ATICP31939 592 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PPM1AP35813 382 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RAD52P43351 418 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CACNB3P54284 484 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 INHBCP55103 352 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ICA1Q05084 483 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DPTQ07507 201 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 BLMHQ13867 455 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TIGD2Q4W5G0 525 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CCDC38Q502W7 563 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM102AQ5T9C2 384 aaPredicted RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 METRNLQ641Q3 311 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FASTKD5Q7L8L6 764 aaKnown RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TBC1D1Q86TI0 1168 aaPredicted RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CAMKK1Q8N5S9 505 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DIS3LQ8TF46 1054 aaKnown RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NRG4Q8WWG1 115 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RSPH1Q8WYR4 309 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DPF2Q92785 391 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SECISBP2LQ93073 1101 aaKnown RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HPS3Q969F9 1004 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TEKT5Q96M29 485 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NUDT16L1Q9BRJ7 211 aaKnown RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MRI1Q9BV20 369 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NUP62CLQ9H1M0 184 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TMEM60Q9H2L4 133 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KMT5AQ9NQR1 393 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CRYL1Q9Y2S2 319 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 USP15Q9Y4E8 981 aaPredicted RBP4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ACTL7AQ9Y615 435 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HS3ST4Q9Y661 456 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PNPLA7Q6ZV29 1317 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LTBP4Q8N2S1 1624 aa4.85□□□□□ -1.63
PDLIM1P4-201ENST00000504327 IQGAP1P46940 1657 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RIMS2Q9UQ26 1411 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZNF335Q9H4Z2 1342 aaPredicted RBP4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 A0A087X1B8 175 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DRGXA6NNA5 263 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM171A2A8MVW0 826 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RNASET2O00584 256 aaKnown RBP4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GPR32O75388 356 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MTA2O94776 668 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CD4P01730 458 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM200BP0CF97 657 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TGFB3P10600 412 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 IL2RBP14784 551 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ATP5JP18859 108 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ELF1P32519 619 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KRT9P35527 623 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 IL6STP40189 918 aaPredicted RBP4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 STT3AP46977 705 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CLNS1AP54105 237 aaKnown RBP4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NAP1L1P55209 391 aaKnown RBP4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TAF12Q16514 161 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LY6G5CQ5SRR4 150 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCSK4Q6UW60 755 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 OVCH2Q7RTZ1 564 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MRGPRGQ86SM5 289 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PLXDC1Q8IUK5 500 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 VRK3Q8IV63 474 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GRAMD1CQ8IYS0 662 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ULK2Q8IYT8 1036 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NDUFAF2Q8N183 169 aa4.84□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KRT78Q8N1N4 520 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms