RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 CNTNAP3BQ96NU0 1288 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 SLC22A12Q96S37 553 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 SYT15Q9BQS2 421 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 CNTNAP3Q9BZ76 1288 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 ECT2Q9H8V3 914 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 POLR3BQ9NW08 1133 aaPredicted RBP23.02■■□□□ 1.28
RNF4-205ENST00000504224 MAGEC2Q9UBF1 373 aaPredicted RBP23.02■■□□□ 1.28
RNF4-205ENST00000504224 WNT6Q9Y6F9 365 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 PTPRJQ12913 1337 aa23.02■■□□□ 1.28
RNF4-205ENST00000504224 SPTLC2O15270 562 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 PDGFRBP09619 1106 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 DRD1P21728 446 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 GJA4P35212 333 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 KCNB1Q14721 858 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 SURF1Q15526 300 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 ZNF77Q15935 545 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 CCDC6Q16204 474 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 DUOXA2Q1HG44 320 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 CACNA2D4Q7Z3S7 1137 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 OSCP1Q8WVF1 389 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 MMS19Q96T76 1030 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 LRRC27Q9C0I9 530 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 ARRDC1-AS1Q9H2J1 176 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 CDH9Q9ULB4 789 aa23.01■■□□□ 1.27
RNF4-205ENST00000504224 C2orf78A6NCI8 922 aa23■■□□□ 1.27
RNF4-205ENST00000504224 FOXD2O60548 495 aaPredicted RBP23■■□□□ 1.27
RNF4-205ENST00000504224 YEATS4O95619 227 aa23■■□□□ 1.27
RNF4-205ENST00000504224 F13A1P00488 732 aa23■■□□□ 1.27
RNF4-205ENST00000504224 LMO2P25791 158 aa23■■□□□ 1.27
RNF4-205ENST00000504224 GRIK1P39086 918 aa23■■□□□ 1.27
RNF4-205ENST00000504224 PSMD2Q13200 908 aa23■■□□□ 1.27
RNF4-205ENST00000504224 AASDHQ4L235 1098 aaPredicted RBP23■■□□□ 1.27
RNF4-205ENST00000504224 PPM1JQ5JR12 505 aa23■■□□□ 1.27
RNF4-205ENST00000504224 FAM171BQ6P995 826 aa23■■□□□ 1.27
RNF4-205ENST00000504224 DPH6Q7L8W6 267 aa23■■□□□ 1.27
RNF4-205ENST00000504224 KBTBD6Q86V97 674 aa23■■□□□ 1.27
RNF4-205ENST00000504224 C12orf50Q8NA57 414 aaPredicted RBP23■■□□□ 1.27
RNF4-205ENST00000504224 LINC00301Q8NCQ3 95 aa23■■□□□ 1.27
RNF4-205ENST00000504224 SH3RF2Q8TEC5 729 aa23■■□□□ 1.27
RNF4-205ENST00000504224 KBTBD7Q8WVZ9 684 aa23■■□□□ 1.27
RNF4-205ENST00000504224 ATP2A3Q93084 1043 aa23■■□□□ 1.27
RNF4-205ENST00000504224 MYLPFQ96A32 169 aa23■■□□□ 1.27
RNF4-205ENST00000504224 HHIPQ96QV1 700 aa23■■□□□ 1.27
RNF4-205ENST00000504224 TNMDQ9H2S6 317 aa23■■□□□ 1.27
RNF4-205ENST00000504224 HSPBP1Q9NZL4 362 aa23■■□□□ 1.27
RNF4-205ENST00000504224 CCDC163A0A0D9SF12 145 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 HDCP19113 662 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 BDNFP23560 247 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 MAGEA11P43364 429 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 ASIC1P78348 528 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 CYP27A1Q02318 531 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 USP4Q13107 963 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 FOXD4L6Q3SYB3 417 aaPredicted RBP22.99■■□□□ 1.27
RNF4-205ENST00000504224 FBXO43Q4G163 708 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 FOXD4L3Q6VB84 417 aaPredicted RBP22.99■■□□□ 1.27
RNF4-205ENST00000504224 RDH13Q8NBN7 331 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 RPLP0P6Q8NHW5 317 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 CD101Q93033 1021 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 DHX58Q96C10 678 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 CRTAC1Q9NQ79 661 aa22.99■■□□□ 1.27
RNF4-205ENST00000504224 TFIP11Q9UBB9 837 aaKnown RBP22.99■■□□□ 1.27
RNF4-205ENST00000504224 ZNF638Q14966 1978 aaKnown RBP22.99■■□□□ 1.27
RNF4-205ENST00000504224 PPP6R2O75170 966 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 DLATP10515 647 aaKnown RBP22.98■■□□□ 1.27
RNF4-205ENST00000504224 ANXA13P27216 316 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 NR1H3Q13133 447 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 SF3A2Q15428 464 aaKnown RBP22.98■■□□□ 1.27
RNF4-205ENST00000504224 MAPRE1Q15691 268 aaKnown RBP22.98■■□□□ 1.27
RNF4-205ENST00000504224 WDR49Q8IV35 697 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 CAMKK1Q8N5S9 505 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 KIAA1586Q9HCI6 787 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 GCNT4Q9P109 453 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 DENND4CQ5VZ89 1909 aa22.98■■□□□ 1.27
RNF4-205ENST00000504224 OBSL1O75147 1896 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 TNNI1P19237 187 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 WARSP23381 471 aaKnown RBP22.97■■□□□ 1.27
RNF4-205ENST00000504224 AMPD3Q01432 767 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 EML3Q32P44 896 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 IL31Q6EBC2 164 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 VSTM1Q6UX27 236 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 TRAPPC11Q7Z392 1133 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 LOXL4Q96JB6 756 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 SPATA17Q96L03 361 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 FNBP1Q96RU3 617 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 TRIM9Q9C026 710 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 SNX25Q9H3E2 840 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 KBTBD4Q9NVX7 518 aa22.97■■□□□ 1.27
RNF4-205ENST00000504224 EIF3DO15371 548 aaKnown RBP eCLIP22.96■■□□□ 1.27
RNF4-205ENST00000504224 HOXD13P35453 343 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 PDE6CP51160 858 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 CYP2J2P51589 502 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 MDH1BQ5I0G3 518 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 DENND5BQ6ZUT9 1274 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 HS2ST1Q7LGA3 356 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 LIMS2Q7Z4I7 341 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 LINC00597Q9H2U6 94 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 CUEDC2Q9H467 287 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 TRPM5Q9NZQ8 1165 aa22.96■■□□□ 1.27
RNF4-205ENST00000504224 CUTAO60888 179 aa22.95■■□□□ 1.26
RNF4-205ENST00000504224 EPN2O95208 641 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms