RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 C1orf210Q8IVY1 113 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 SCN4BQ8IWT1 228 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 MYCBPAPQ8TBZ2 947 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 SMARCE1Q969G3 411 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 CLDN23Q96B33 292 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 CCDC34Q96HJ3 373 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 NELL2Q99435 816 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 SNX25Q9H3E2 840 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 MAN1B1Q9UKM7 699 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 TRIM49BA6NDI0 452 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 IKBKBO14920 756 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 ASS1P00966 412 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 FAM163BP0C2L3 166 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 CSH1P0DML2 217 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 CSH2P0DML3 217 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 CD44P16070 742 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 BMP6P22004 513 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 PSMC2P35998 433 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 MLLT6P55198 1093 aaPredicted RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF667Q5HYK9 610 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 ISM2Q6H9L7 571 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 C4orf50Q6ZRC1 276 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 INTS8Q75QN2 995 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 ZC3H3Q8IXZ2 948 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 MAML2Q8IZL2 1156 aaPredicted RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 ADSSL1Q8N142 457 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 TAS1R2Q8TE23 839 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 BCO2Q9BYV7 579 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 SMG9Q9H0W8 520 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 APOBEC3GQ9HC16 384 aaKnown RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 RMND1Q9NWS8 449 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 HMGXB4Q9UGU5 601 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 ZMYM5Q9UJ78 669 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 MAGED2Q9UNF1 606 aaPredicted RBP19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 PIAS3Q9Y6X2 628 aa19.21■□□□□ 0.67
SH3TC1-208ENST00000504223 SOBPA7XYQ1 873 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 CLDN5O00501 218 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 MAN2B1O00754 1011 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 GFRA3O60609 400 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 SMC2O95347 1197 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 PTPN1P18031 435 aaKnown RBP19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 RPL13P26373 211 aaKnown RBP19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 MAGEA9P43362 315 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 ASPAP45381 313 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 USP46P62068 366 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 CYP27A1Q02318 531 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 ANKRD40Q6AI12 368 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 YAF2Q8IY57 180 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 ELOA2Q8IYF1 753 aaPredicted RBP19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 CMTM8Q8IZV2 173 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 RIN3Q8TB24 985 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 ZNF518BQ9C0D4 1074 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 MAGEC2Q9UBF1 373 aaPredicted RBP19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 MRPS17Q9Y2R5 130 aaKnown RBP19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 MYH10P35580 1976 aa19.2■□□□□ 0.66
SH3TC1-208ENST00000504223 PRR23AA6NEV1 266 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 A8MXQ7 604 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 DDX6P26196 483 aaKnown RBP eCLIP19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 PIK3CAP42336 1068 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 RPS9P46781 194 aaKnown RBP19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 ORC1Q13415 861 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 MAPRE1Q15691 268 aaKnown RBP19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 SGSM1Q2NKQ1 1148 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 ARHGAP29Q52LW3 1261 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 TXNDC8Q6A555 127 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 ASCL5Q7RTU5 278 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 B3GALNT2Q8NCR0 500 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 ZFYVE19Q96K21 471 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 B3GNT5Q9BYG0 378 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 MMRN2Q9H8L6 949 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
SH3TC1-208ENST00000504223 DPYSL4O14531 572 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 KINO60870 393 aaKnown RBP19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 SP9P0CG40 484 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 ENPEPQ07075 957 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 PAQR9Q6ZVX9 377 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 MON1AQ86VX9 555 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 CELF5Q8N6W0 485 aaKnown RBP19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 MAB21L3Q8N8X9 362 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 BPIFB1Q8TDL5 484 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 SEMA4DQ92854 862 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 USP13Q92995 863 aaPredicted RBP19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 SPATA17Q96L03 361 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 UXTQ9UBK9 157 aaPredicted RBP19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 CCL26Q9Y258 94 aa19.18■□□□□ 0.66
SH3TC1-208ENST00000504223 PATJQ8NI35 1801 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 F8VP50 259 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 CETN3O15182 167 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 NCAM2O15394 837 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 CLSTN1O94985 981 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 KRT13P13646 458 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 GRIK1P39086 918 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 CSGALNACT1Q8TDX6 532 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 FAM3CQ92520 227 aa19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 MRPS31Q92665 395 aaKnown RBP19.17■□□□□ 0.66
SH3TC1-208ENST00000504223 TAF4BQ92750 862 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms