RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 FAM160B1Q5W0V3 765 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 APOA5Q6Q788 366 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 ZNF782Q6ZMW2 699 aaPredicted RBP5.06□□□□□ -1.6
SUB1-204ENST00000504016 DNAJC5GQ8N7S2 189 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 RFKQ969G6 155 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 FKBP10Q96AY3 582 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 ACTRT3Q9BYD9 372 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 AMBRA1Q9C0C7 1298 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 TPCN1Q9ULQ1 816 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
SUB1-204ENST00000504016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.06□□□□□ -1.6
SUB1-204ENST00000504016 TARM1B6A8C7 271 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 MYO1CO00159 1063 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 DCLK1O15075 740 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 TBX3O15119 743 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 TBC1D4O60343 1298 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 CHEK2O96017 543 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 PDHA1P08559 390 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 DRD4P21917 467 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 KELP23276 732 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 ZNF134P52741 427 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 LILRA4P59901 499 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 CTBP1Q13363 440 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 BMPR2Q13873 1038 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 GBX1Q14549 363 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 AMOTQ4VCS5 1084 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 C3orf38Q5JPI3 329 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 ZNF626Q68DY1 528 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 DARS2Q6PI48 645 aaKnown RBP5.05□□□□□ -1.6
SUB1-204ENST00000504016 TMEM108Q6UXF1 575 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 KSR2Q6VAB6 950 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 CCAR1Q8IX12 1150 aaKnown RBP5.05□□□□□ -1.6
SUB1-204ENST00000504016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.05□□□□□ -1.6
SUB1-204ENST00000504016 C9orf106Q8NAJ2 232 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 RAPGEF4Q8WZA2 1011 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 OSBPL9Q96SU4 736 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 PRDM11Q9NQV5 511 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 XPR1Q9UBH6 696 aa5.05□□□□□ -1.6
SUB1-204ENST00000504016 hCG_1984214I3L0E3 225 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 NDUFB7P17568 137 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 ITGALP20701 1170 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 GCLCP48506 637 aaPredicted RBP5.04□□□□□ -1.6
SUB1-204ENST00000504016 SLC11A2P49281 568 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 SLC13A2Q13183 592 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 TBCCQ15814 346 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 LONRF3Q496Y0 759 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 RBM20Q5T481 1227 aaKnown RBP5.04□□□□□ -1.6
SUB1-204ENST00000504016 EMC10Q5UCC4 262 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 VPS53Q5VIR6 699 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 LAYNQ6UX15 382 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 ZNF783Q6ZMS7 281 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
SUB1-204ENST00000504016 ZNF551Q7Z340 670 aaPredicted RBP5.04□□□□□ -1.6
SUB1-204ENST00000504016 PPP1R32Q7Z5V6 425 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 DGKHQ86XP1 1220 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 ZNF280BQ86YH2 543 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 OR6B3Q8NGW1 331 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 LRTOMTQ8WZ04 291 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 DDX17Q92841 729 aaKnown RBP5.04□□□□□ -1.6
SUB1-204ENST00000504016 TRIM54Q9BYV2 358 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 SIK2Q9H0K1 926 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 NRIP3Q9NQ35 241 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 SERTAD4Q9NUC0 356 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 STK32BQ9NY57 414 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 DKK3Q9UBP4 350 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 HESX1Q9UBX0 185 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 MRPS17Q9Y2R5 130 aaKnown RBP5.04□□□□□ -1.6
SUB1-204ENST00000504016 PLEKHM1Q9Y4G2 1056 aa5.04□□□□□ -1.6
SUB1-204ENST00000504016 IKBKBO14920 756 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
SUB1-204ENST00000504016 SOAT2O75908 522 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 ZBED1O96006 694 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 FAM163BP0C2L3 166 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 RHCEP18577 417 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 PEX2P28328 305 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 PTGER1P34995 402 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 SSBP2P81877 361 aaPredicted RBP5.03□□□□□ -1.6
SUB1-204ENST00000504016 SP2Q02086 613 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 RHDQ02161 417 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 MAPK7Q13164 816 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 IQCB1Q15051 598 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 SLC44A4Q53GD3 710 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 COBLL1Q53SF7 1204 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 CEP85Q6P2H3 762 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 FAM136AQ96C01 138 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 C8orf48Q96LL4 319 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 SEMA4CQ9C0C4 833 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
SUB1-204ENST00000504016 ARHGEF3Q9NR81 526 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 SH3BP4Q9P0V3 963 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 SERGEFQ9UGK8 458 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 OGDHLQ9ULD0 1010 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 MED16Q9Y2X0 877 aa5.03□□□□□ -1.6
SUB1-204ENST00000504016 PPM1DO15297 605 aa5.02□□□□□ -1.61
SUB1-204ENST00000504016 TP73O15350 636 aa5.02□□□□□ -1.61
SUB1-204ENST00000504016 MGEA5O60502 916 aa5.02□□□□□ -1.61
SUB1-204ENST00000504016 JTBO76095 146 aa5.02□□□□□ -1.61
SUB1-204ENST00000504016 BMP15O95972 392 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms