RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 NIPAL4Q0D2K0 466 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 STX3Q13277 289 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ORC2Q13416 577 aaPredicted RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 GCKRQ14397 625 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 HIC1Q14526 733 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 PSMD6Q15008 389 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ZNF174Q15697 407 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 KCTD21Q4G0X4 260 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 PLEKHG4Q58EX7 1191 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 SCARA3Q6AZY7 606 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 FBXL19Q6PCT2 694 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 KIF6Q6ZMV9 814 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 IDO2Q6ZQW0 420 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 RFPL4BQ6ZWI9 263 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 KBTBD6Q86V97 674 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 JAZF1Q86VZ6 243 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TTC30AQ86WT1 665 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 MICU3Q86XE3 530 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ZC3H3Q8IXZ2 948 aaKnown RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 SRRM1Q8IYB3 904 aaKnown RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TTC5Q8N0Z6 440 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 THEMISQ8N1K5 641 aaPredicted RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ZNF276Q8N554 614 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TMCO5AQ8N6Q1 288 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TRIML2Q8N7C3 387 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 UBL4BQ8N7F7 174 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TEX19Q8NA77 164 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 FANCBQ8NB91 859 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TTC13Q8NBP0 860 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 NEDD1Q8NHV4 660 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 UHMK1Q8TAS1 419 aaKnown RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 OXER1Q8TDS5 423 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 U2AF1L4Q8WU68 220 aaKnown RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 RFFLQ8WZ73 363 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 CDKL2Q92772 493 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 GLG1Q92896 1179 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TRIM63Q969Q1 353 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 MARVELD3Q96A59 401 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 THAP11Q96EK4 314 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 CEP95Q96GE4 821 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 SLC39A13Q96H72 371 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 OXNAD1Q96HP4 312 aaPredicted RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 RMDN3Q96TC7 470 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 SHCBP1LQ9BZQ2 653 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TRIM31Q9BZY9 425 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TRIM9Q9C026 710 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 GANQ9H2C0 597 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 TRABDQ9H4I3 376 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 STN1Q9H668 368 aaKnown RBP6.23□□□□□ -1.41
LINC01340-201ENST00000504012 KCNK13Q9HB14 408 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 SCUBE2Q9NQ36 999 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ARHGEF4Q9NR80 690 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 AAASQ9NRG9 546 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 OLFML3Q9NRN5 406 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 COMMD8Q9NX08 183 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 MKS1Q9NXB0 559 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 STK39Q9UEW8 545 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 KCNN3Q9UGI6 736 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ADAMTS6Q9UKP5 1117 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 PSMD13Q9UNM6 376 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 SLC8A2Q9UPR5 921 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 ZBTB1Q9Y2K1 713 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 PCDHGA11Q9Y5H2 935 aa6.23□□□□□ -1.41
LINC01340-201ENST00000504012 RTL9Q8NET4 1388 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 A0A087WXM4 84 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 NPHP3-ACAD11A0A0J9YXS1 232 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 TEX51A0A1B0GUA7 166 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 ILVBLA1L0T0 632 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 ARHGEF35A5YM69 484 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 TRIM64A6NGJ6 449 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 NEURL1BA8MQ27 555 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CFAP99D6REC4 459 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 H3BNH8 94 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 EYA2O00167 538 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 NUAK1O60285 661 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 B4GALT4O60513 344 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 H6PDO95479 791 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CRTAMO95727 393 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 DLDP09622 509 aaKnown RBP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 C6orf222P0C671 652 aaPredicted RBP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CALM1P0DP23 149 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CALM2P0DP24 149 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CALM3P0DP25 149 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CCDC130P13994 396 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 POLR2CP19387 275 aaPredicted RBP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 AOC1P19801 751 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CALML3P27482 149 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 MZF1P28698 734 aaPredicted RBP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 CSTF2P33240 577 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 GNL1P36915 607 aaPredicted RBP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 GRIK1P39086 918 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 STT3AP46977 705 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 DNA2P51530 1060 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 NUBP1P53384 320 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 STX1BP61266 288 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 FKBP3Q00688 224 aaKnown RBP6.22□□□□□ -1.41
LINC01340-201ENST00000504012 MECOMQ03112 1051 aa6.22□□□□□ -1.41
LINC01340-201ENST00000504012 RIPPLY1Q0D2K3 151 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms