RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CHST12Q9NRB3 414 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 RNF186Q9NXI6 227 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 GRIN2DO15399 1336 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 hCG_1818297A0A087WSY0 165 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 C3orf70A6NLC5 250 aaPredicted RBP22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 KRT14P02533 472 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 IL1R2P27930 398 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 CDKN2BP42772 138 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 SP3Q02447 781 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 PTK6Q13882 451 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 KCNA10Q16322 511 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 SV2CQ496J9 727 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM102AQ5T9C2 384 aaPredicted RBP22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 PMF1Q6P1K2 205 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM183BPQ6ZVS7 135 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM49BQ9NUQ9 324 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM105AQ9NUU6 356 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 NEU2Q9Y3R4 380 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 A8MXQ7 604 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 TULP2O00295 520 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 TJP3O95049 919 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 KRT7P08729 469 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 KRT10P13645 584 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 PRKAR2AP13861 404 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 LILRA4P59901 499 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 TTMPQ5BVD1 217 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 TFDP3Q5H9I0 405 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 TMEM110Q86TL2 294 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 WHRNQ9P202 907 aa22.46■■□□□ 1.19
UBE2D3-216ENST00000503742 C2CD4BA6NLJ0 364 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 HCRTO43612 131 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 CTSHP09668 335 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 ELNP15502 786 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 IVDP26440 423 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 GNL1P36915 607 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 ZNF143P52747 638 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 HADHQ16836 314 aaKnown RBP22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 ZFYVE27Q5T4F4 411 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 DRICH1Q6PGQ1 229 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 GSTCDQ8NEC7 633 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 STK32AQ8WU08 396 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 ACSF2Q96CM8 615 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 ZFP42Q96MM3 310 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 DNAH12Q6ZR08 3092 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 GOLGA6CA6NDK9 693 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 TP73O15350 636 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 GAS8O95995 478 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 GOLGA6DP0CG33 693 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 LMO2P25791 158 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 TAZQ16635 292 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 ZNF618Q5T7W0 954 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 OR6B2Q6IFH4 312 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 TRNP1Q6NT89 227 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 APPL2Q8NEU8 664 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 PIWIL1Q96J94 861 aaKnown RBP22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 LPIN3Q9BQK8 851 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 GOLGA6AQ9NYA3 693 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 HESX1Q9UBX0 185 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 EFR3BQ9Y2G0 817 aa22.45■■□□□ 1.18
UBE2D3-216ENST00000503742 LRRD1A4D1F6 860 aa22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 MEIS3P2A8K0S8 358 aa22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 GABBR2O75899 941 aa22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 RGS7P49802 495 aa22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 KAZNQ674X7 775 aa22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 UBLCP1Q8WVY7 318 aaPredicted RBP22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 ASNSD1Q9NWL6 643 aa22.44■■□□□ 1.18
UBE2D3-216ENST00000503742 THSD7BQ9C0I4 1608 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 PIK3R2O00459 728 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 GPD1P21695 349 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 MIPP30301 263 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 PCK1P35558 622 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 PDE4CQ08493 712 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 ODF2Q5BJF6 829 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 OLFML1Q6UWY5 402 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 REM2Q8IYK8 340 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 TOP6BLQ8N6T0 577 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 FAM118BQ9BPY3 351 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 CNPY3Q9BT09 278 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 EPB41L4BQ9H329 900 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 SNX25Q9H3E2 840 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 AGO3Q9H9G7 860 aaKnown RBP22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 MTRF1LQ9UGC7 380 aaKnown RBP22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 ATP8A1Q9Y2Q0 1164 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 GPR182O15218 404 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 LIASO43766 372 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 HUS1O60921 280 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 PDGFRBP09619 1106 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 WARSP23381 471 aaKnown RBP22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 RPL34P49207 117 aaKnown RBP22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 ANKRD52Q8NB46 1076 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 CMASQ8NFW8 434 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 RXFP2Q8WXD0 754 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 KHSRPQ92945 711 aaKnown RBP eCLIP22.43■■□□□ 1.183e-7■■■□□ 18.3
UBE2D3-216ENST00000503742 ZWILCHQ9H900 591 aa22.43■■□□□ 1.18
UBE2D3-216ENST00000503742 RNF8O76064 485 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 TRUB2O95900 331 aaKnown RBP22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 FAM163BP0C2L3 166 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 ITIH2P19823 946 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 CALCOCO2Q13137 446 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms