RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 YARSP54577 528 aaKnown RBP23.64■■□□□ 1.38
PCDH1-204ENST00000503492 TAZQ16635 292 aa23.64■■□□□ 1.38
PCDH1-204ENST00000503492 TNFAIP8L3Q5GJ75 292 aa23.64■■□□□ 1.38
PCDH1-204ENST00000503492 IPO4Q8TEX9 1081 aaKnown RBP23.64■■□□□ 1.38
PCDH1-204ENST00000503492 TMEM40Q8WWA1 233 aa23.64■■□□□ 1.38
PCDH1-204ENST00000503492 ROPN1BQ9BZX4 212 aaPredicted RBP23.64■■□□□ 1.38
PCDH1-204ENST00000503492 ROPN1Q9HAT0 212 aaPredicted RBP23.64■■□□□ 1.38
PCDH1-204ENST00000503492 NINJ2Q9NZG7 142 aa23.64■■□□□ 1.38
PCDH1-204ENST00000503492 GJD2Q9UKL4 321 aa23.64■■□□□ 1.38
PCDH1-204ENST00000503492 EFR3BQ9Y2G0 817 aa23.64■■□□□ 1.38
PCDH1-204ENST00000503492 RRP15Q9Y3B9 282 aaKnown RBP23.64■■□□□ 1.38
PCDH1-204ENST00000503492 E5RJQ4 531 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 CD48P09326 243 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 PSEN2P49810 448 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 HUNKP57058 714 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 IRF5Q13568 498 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 GOLGA7BQ2TAP0 167 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 TRNP1Q6NT89 227 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 ALKAL1Q6UXT8 129 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 NLRP14Q86W24 1093 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 SLC35B2Q8TB61 432 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 MDM1Q8TC05 714 aa23.64■■□□□ 1.37
PCDH1-204ENST00000503492 PIWIL1Q96J94 861 aaKnown RBP23.64■■□□□ 1.37
PCDH1-204ENST00000503492 SAE1Q9UBE0 346 aaPredicted RBP23.64■■□□□ 1.37
PCDH1-204ENST00000503492 HAS3O00219 553 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 RECQL4O94761 1208 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 ARSEP51690 589 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 DYNLT1P63172 113 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 ZNF200P98182 395 aaPredicted RBP23.63■■□□□ 1.37
PCDH1-204ENST00000503492 TAF5Q15542 800 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 LONRF1Q17RB8 773 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 PPP1R26Q5T8A7 1209 aaPredicted RBP23.63■■□□□ 1.37
PCDH1-204ENST00000503492 FAM183BPQ6ZVS7 135 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 MYCBPAPQ8TBZ2 947 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 CCHCR1Q8TD31 782 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 CNOT10Q9H9A5 744 aaKnown RBP23.63■■□□□ 1.37
PCDH1-204ENST00000503492 E7EVH7 732 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 DNALI1O14645 258 aaPredicted RBP23.63■■□□□ 1.37
PCDH1-204ENST00000503492 TREHO43280 583 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 ITGAVP06756 1048 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 ACAP1Q15027 740 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 OR6B2Q6IFH4 312 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 MFSD5Q6N075 450 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 ACOT1Q86TX2 421 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 BEST2Q8NFU1 509 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 CCT8L2Q96SF2 557 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 TMEM121Q9BTD3 319 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 APOL6Q9BWW8 343 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 CNTN3Q9P232 1028 aa23.63■■□□□ 1.37
PCDH1-204ENST00000503492 TRIP12Q14669 1992 aaPredicted RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 EBAG9O00559 213 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 RNF8O76064 485 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 TRUB2O95900 331 aaKnown RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 AKAP5P24588 427 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 MMP13P45452 471 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 PCBP1Q15365 356 aaKnown RBP eCLIP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 BBS12Q6ZW61 710 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 USP18Q9UMW8 372 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 TULP2O00295 520 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 CST8O60676 142 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 RGS7P49802 495 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 ZNF143P52747 638 aaPredicted RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 BEX3Q00994 111 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 PLCB3Q01970 1234 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 SNX17Q15036 470 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 STILQ15468 1287 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 TAF1CQ15572 869 aaPredicted RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 PKDCCQ504Y2 493 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 SH3PXD2AQ5TCZ1 1133 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 LRRC52Q8N7C0 313 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 CMASQ8NFW8 434 aaPredicted RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 ACTL9Q8TC94 416 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 ZNF473Q8WTR7 871 aaKnown RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 USP6NLQ92738 828 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 PEBP4Q96S96 227 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 TRIM6Q9C030 488 aaPredicted RBP23.62■■□□□ 1.37
PCDH1-204ENST00000503492 ASNSD1Q9NWL6 643 aa23.62■■□□□ 1.37
PCDH1-204ENST00000503492 C2CD4BA6NLJ0 364 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 TRAPPC3O43617 180 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 MYL3P08590 195 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 GPD1P21695 349 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 OTUD4Q01804 1114 aaKnown RBP23.61■■□□□ 1.37
PCDH1-204ENST00000503492 GPS1Q13098 491 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 RAB6CQ53S08 254 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 C9orf57Q5W0N0 161 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 TTC30AQ86WT1 665 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 RELL1Q8IUW5 271 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 ZCCHC9Q8N567 271 aaKnown RBP23.61■■□□□ 1.37
PCDH1-204ENST00000503492 RXFP2Q8WXD0 754 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 RAB6CQ9H0N0 254 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 FAM49BQ9NUQ9 324 aa23.61■■□□□ 1.37
PCDH1-204ENST00000503492 CYP2B6P20813 491 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 PMF1Q6P1K2 205 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 RASAL3Q86YV0 1011 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 KCTD6Q8NC69 237 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 HSPH1Q92598 858 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 PIN4Q9Y237 131 aaKnown RBP23.6■■□□□ 1.37
PCDH1-204ENST00000503492 GMNCA6NCL1 334 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 FAM107AO95990 144 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 SELENOSQ9BQE4 189 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms