RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TDGQ13569 410 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 PARM1Q6UWI2 310 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 C11orf57Q6ZUT1 292 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 UBALD2Q8IYN6 164 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 C12orf29Q8N999 325 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 ATXN3LQ9H3M9 355 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 SAMSN1Q9NSI8 373 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 TMEM30AQ9NV96 361 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 NUMBLQ9Y6R0 609 aa19.37■□□□□ 0.69
PDLIM7-209ENST00000503346 DOCK6Q96HP0 2047 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 F11P03951 625 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 CCDC130P13994 396 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 YWHAEP62258 255 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 TYRO3Q06418 890 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 MAN2A1Q16706 1144 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 SLC44A3Q8N4M1 653 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 UBR7Q8N806 425 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 STKLD1Q8NE28 680 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 SLC2A14Q8TDB8 520 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 RSAD2Q8WXG1 361 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 FGF14Q92915 247 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 SMARCD1Q96GM5 515 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 TMEM176AQ96HP8 235 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 ZSWIM3Q96MP5 696 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 GCNAQ96QF7 691 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 HNRNPABQ99729 332 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 MED10Q9BTT4 135 aa19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 INTS2Q9H0H0 1204 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 UXTQ9UBK9 157 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-209ENST00000503346 GTPBP10A4D1E9 387 aaKnown RBP19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 RAD23BP54727 409 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 GCNT1Q02742 428 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 ZNF394Q53GI3 561 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 FAM78AQ5JUQ0 283 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 DENND5BQ6ZUT9 1274 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 TMEM150AQ86TG1 271 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 SLC4A11Q8NBS3 891 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 ASB16Q96NS5 453 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 TUBGCP2Q9BSJ2 902 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 TTLL2Q9BWV7 592 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 TRPV4Q9HBA0 871 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 CSNK1G1Q9HCP0 422 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 DMAP1Q9NPF5 467 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 FAM49BQ9NUQ9 324 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 EHD2Q9NZN4 543 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 GCNT4Q9P109 453 aa19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 MAGED2Q9UNF1 606 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-209ENST00000503346 DOCK8Q8NF50 2099 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 KCNJ18B7U540 433 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 ECI2O75521 394 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 AP1G2O75843 785 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 FCARP24071 287 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 EEF1GP26641 437 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 KCNJ12Q14500 433 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 VWA3BQ502W6 1294 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 ARHGAP15Q53QZ3 475 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 HSP90AA4PQ58FG1 418 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 TCP11X2Q5H9J9 407 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 CDKAL1Q5VV42 579 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 GBP6Q6ZN66 633 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 ARHGEF19Q8IW93 802 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 PPM1KQ8N3J5 372 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 ZSCAN18Q8TBC5 510 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 SMARCD2Q92925 531 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 ELSPBP1Q96BH3 223 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 CYFIP2Q96F07 1278 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 RPP25Q9BUL9 199 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 C1QTNF1Q9BXJ1 281 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 TASP1Q9H6P5 420 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 KRT82Q9NSB4 513 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 ZMYM5Q9UJ78 669 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 DUSP12Q9UNI6 340 aa19.34■□□□□ 0.69
PDLIM7-209ENST00000503346 SOBPA7XYQ1 873 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 TADA3O75528 432 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 FAM200BP0CF97 657 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 PRKCSHP14314 528 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 ACO1P21399 889 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 DDX6P26196 483 aaKnown RBP eCLIP19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 WEE1P30291 646 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 CYP4F8P98187 520 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 MYL5Q02045 173 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 SIGLEC14Q08ET2 396 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 MIIPQ5JXC2 388 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 STXBP5Q5T5C0 1151 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 GPR158Q5T848 1215 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 ARHGAP17Q68EM7 881 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 ZMIZ2Q8NF64 920 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 ST13P5Q8NFI4 369 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 KAT5Q92993 513 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 HEXIM2Q96MH2 286 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 KCNK16Q96T55 309 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 SMOQ99835 787 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 NDST4Q9H3R1 872 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 SMOC2Q9H3U7 446 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 SLITRK6Q9H5Y7 841 aa19.33■□□□□ 0.68
PDLIM7-209ENST00000503346 TNFRSF10BO14763 440 aa19.32■□□□□ 0.68
PDLIM7-209ENST00000503346 LETM1O95202 739 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-209ENST00000503346 ADORA2BP29275 332 aa19.32■□□□□ 0.68
PDLIM7-209ENST00000503346 USP46P62068 366 aa19.32■□□□□ 0.68
PDLIM7-209ENST00000503346 EXOC3L4Q17RC7 722 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms