RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 MDH1BQ5I0G3 518 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 OR6B3Q8NGW1 331 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 ATRIPQ8WXE1 791 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 MRPS31Q92665 395 aaKnown RBP17.38■□□□□ 0.37
SCLT1-204ENST00000503215 TRMT2BQ96GJ1 504 aaKnown RBP17.38■□□□□ 0.37
SCLT1-204ENST00000503215 FUBP3Q96I24 572 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCLT1-204ENST00000503215 KCTD10Q9H3F6 313 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 EBF3Q9H4W6 596 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 TRPC7Q9HCX4 862 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 TDP1Q9NUW8 608 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 EXOC1Q9NV70 894 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 NXF1Q9UBU9 619 aaKnown RBP17.38■□□□□ 0.37
SCLT1-204ENST00000503215 C2orf78A6NCI8 922 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
SCLT1-204ENST00000503215 LILRB5O75023 590 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 CDH8P55286 799 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 DLG4P78352 724 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 TDRD10Q5VZ19 366 aaKnown RBP17.37■□□□□ 0.37
SCLT1-204ENST00000503215 NAIF1Q69YI7 327 aaPredicted RBP17.37■□□□□ 0.37
SCLT1-204ENST00000503215 MAMSTRQ6ZN01 415 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 RALGPS2Q86X27 583 aaPredicted RBP17.37■□□□□ 0.37
SCLT1-204ENST00000503215 TTC16Q8NEE8 873 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 MYCBPAPQ8TBZ2 947 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 SNX25Q9H3E2 840 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 GCNT4Q9P109 453 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 PCDHGA2Q9Y5H1 932 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 OBSL1O75147 1896 aa17.37■□□□□ 0.37
SCLT1-204ENST00000503215 KIF26AQ9ULI4 1882 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 LRRIQ3A6PVS8 624 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 CLDN5O00501 218 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 TACC1O75410 805 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 VNN1O95497 513 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 C4BPAP04003 597 aaKnown RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 PTPN1P18031 435 aaKnown RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 DDX6P26196 483 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 GRIK1P39086 918 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 RAP1GAPP47736 663 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 PLCB2Q00722 1185 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 TRPC3Q13507 836 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 ITPRIPL2Q3MIP1 535 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 C4orf50Q6ZRC1 276 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 KIAA2013Q8IYS2 634 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 ARL14EPQ8N8R7 260 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 B3GNT5Q9BYG0 378 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 SDCBP2Q9H190 292 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 GOLPH3LQ9H4A5 285 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 GDPD2Q9HCC8 539 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 FBRSL1Q9HCM7 1045 aaKnown RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 THG1LQ9NWX6 298 aaKnown RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 UXTQ9UBK9 157 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-204ENST00000503215 DCHS1Q96JQ0 3298 aa17.36■□□□□ 0.37
SCLT1-204ENST00000503215 FAM237AA0A1B0GTK4 181 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 PHACTR2O75167 634 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 SYKP43405 635 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 TNNC1P63316 161 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 KRT85P78386 507 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 ZXDBP98169 803 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 RUNX3Q13761 415 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 CCINQ13939 588 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 MSANTD3Q96H12 275 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 ZNF518BQ9C0D4 1074 aa17.35■□□□□ 0.37
SCLT1-204ENST00000503215 ZNF638Q14966 1978 aaKnown RBP17.34■□□□□ 0.37
SCLT1-204ENST00000503215 F8VP50 259 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 STAU1O95793 577 aaKnown RBP17.34■□□□□ 0.37
SCLT1-204ENST00000503215 NR3C1P04150 777 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 RPN1P04843 607 aaKnown RBP17.34■□□□□ 0.37
SCLT1-204ENST00000503215 CXCL12P48061 93 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 CLDN10P78369 228 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 PSMD2Q13200 908 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 BIRC3Q13489 604 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 C1orf220Q5T0J3 134 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 FSTL4Q6MZW2 842 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 VSTM1Q6UX27 236 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 SLC9A9Q8IVB4 645 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 SPEM1Q8N4L4 309 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 RUBCNQ92622 972 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 SPATA17Q96L03 361 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 HINFPQ9BQA5 517 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 POLR3BQ9NW08 1133 aaPredicted RBP17.34■□□□□ 0.37
SCLT1-204ENST00000503215 USP25Q9UHP3 1055 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 ZMYM5Q9UJ78 669 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 MAPK8IP1Q9UQF2 711 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 WNT6Q9Y6F9 365 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 DMXL1Q9Y485 3027 aa17.34■□□□□ 0.37
SCLT1-204ENST00000503215 ATG2BQ96BY7 2078 aa17.33■□□□□ 0.37
SCLT1-204ENST00000503215 GREB1Q4ZG55 1949 aa17.33■□□□□ 0.37
SCLT1-204ENST00000503215 TRAV19A0A0A6YYK7 116 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 SOBPA7XYQ1 873 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 A8MXQ7 604 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 CHURC1-FNTBB4DL54 471 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 K7ESF4 209 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 FNTBP49356 437 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 CCR3P51677 355 aa17.33■□□□□ 0.36
SCLT1-204ENST00000503215 SRSF5Q13243 272 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms