RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PIGHQ14442 188 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 MFSD10Q14728 455 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 LRRC38Q5VT99 294 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 PPP1R13LQ8WUF5 828 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 LENG1Q96BZ8 264 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 ATP6V1G3Q96LB4 118 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 R3HDM2Q9Y2K5 976 aaKnown RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 N6AMT1Q9Y5N5 214 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 GOLGA6L10A6NI86 522 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 F8VP50 259 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 MICAL2O94851 1124 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 TCF4P15884 667 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 ACTN2P35609 894 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 CETN2P41208 172 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 KRT17Q04695 432 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 ANKS1BQ7Z6G8 1248 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 RCOR2Q8IZ40 523 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 NIPA2Q8N8Q9 360 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 USP6NLQ92738 828 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 ART4Q93070 314 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 HOMER3Q9NSC5 361 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 MTRF1LQ9UGC7 380 aaKnown RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 POLG2Q9UHN1 485 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 SIGLEC16A6NMB1 481 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 SHOX2O60902 331 aaPredicted RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 MYZAPP0CAP1 466 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 PSEN2P49810 448 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 ZNF157P51786 506 aaPredicted RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 SKOR1P84550 965 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 NFX1Q12986 1120 aaKnown RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 CCL14Q16627 93 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 ATP13A4Q4VNC1 1196 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 SLC27A1Q6PCB7 646 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 RUFY4Q6ZNE9 571 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 GRK7Q8WTQ7 553 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 OSMRQ99650 979 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 FAM129AQ9BZQ8 928 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 PLEKHA5Q9HAU0 1116 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 SNTG2Q9NY99 539 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 TJP2Q9UDY2 1190 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
USP46-204ENST00000503060 DERAQ9Y315 318 aa12.18□□□□□ -0.46
USP46-204ENST00000503060 CITO14578 2027 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 KRT1P04264 644 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 DARSP14868 501 aaKnown RBP12.17□□□□□ -0.46
USP46-204ENST00000503060 PMS2P54278 862 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 GSCP56915 257 aaPredicted RBP12.17□□□□□ -0.46
USP46-204ENST00000503060 PTK6Q13882 451 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 HIC1Q14526 733 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 TAF11Q15544 211 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 CNGA2Q16280 664 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 CCNG2Q16589 344 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 ALKBH2Q6NS38 261 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 LEKR1Q6ZMV7 388 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 SNX27Q96L92 541 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 SLITRK1Q96PX8 696 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 CPXM1Q96SM3 734 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 EIF2AQ9BY44 585 aaKnown RBP12.17□□□□□ -0.46
USP46-204ENST00000503060 FAM124BQ9H5Z6 455 aaPredicted RBP12.17□□□□□ -0.46
USP46-204ENST00000503060 KLHL11Q9NVR0 708 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 CLIC5Q9NZA1 410 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 WHRNQ9P202 907 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 PI4K2BG5E9Z4 385 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 HAS3O00219 553 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 GAS8O95995 478 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 KRT3P12035 628 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 CYP2B6P20813 491 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 RFC1P35251 1148 aaPredicted RBP12.17□□□□□ -0.46
USP46-204ENST00000503060 TSPAN7P41732 249 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 NDST1P52848 882 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP46-204ENST00000503060 SYCP2LQ5T4T6 812 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 NOTUMQ6P988 496 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 C17orf99Q6UX52 265 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 XYLT1Q86Y38 959 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 HEXIM2Q96MH2 286 aaKnown RBP12.17□□□□□ -0.46
USP46-204ENST00000503060 CXCL16Q9H2A7 254 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 EPB41L4BQ9H329 900 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 CHST12Q9NRB3 414 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 ASIC3Q9UHC3 531 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 DOCK3Q8IZD9 2030 aa12.17□□□□□ -0.46
USP46-204ENST00000503060 M0QYV0 167 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 HMGCRP04035 888 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 ERBB2P04626 1255 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 MYL3P08590 195 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 PSMA2P25787 234 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 CPT1AP50416 773 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms