RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 VPS16Q9H269 839 aa17.86■□□□□ 0.45
TSPAN17-203ENST00000503030 AVENQ9NQS1 362 aaPredicted RBP17.86■□□□□ 0.45
TSPAN17-203ENST00000503030 KRT82Q9NSB4 513 aa17.86■□□□□ 0.45
TSPAN17-203ENST00000503030 CDH7Q9ULB5 785 aa17.86■□□□□ 0.45
TSPAN17-203ENST00000503030 MUC3AQ02505 3323 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 TNFRSF10AO00220 468 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 TRIM66O15016 1216 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 ASGR2P07307 311 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 TPM2P07951 284 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 CSH1P0DML2 217 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 CSH2P0DML3 217 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 LAMP2P13473 410 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 CDK11BP21127 795 aaKnown RBP17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 GABRR2P28476 465 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 RAD23BP54727 409 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 EPHA5P54756 1037 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 NCAPHQ15003 741 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 KRT31Q15323 416 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 TRIM65Q6PJ69 517 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 PAQR9Q6ZVX9 377 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 SLC4A11Q8NBS3 891 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 DOCK8Q8NF50 2099 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 CYFIP2Q96F07 1278 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 SMARCD1Q96GM5 515 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 TMEM176AQ96HP8 235 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 GCNAQ96QF7 691 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 ATXN3LQ9H3M9 355 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 UBE2TQ9NPD8 197 aaPredicted RBP17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 TMEM30AQ9NV96 361 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
TSPAN17-203ENST00000503030 NCOR1O75376 2440 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 GTPBP10A4D1E9 387 aaKnown RBP17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 MOSPD3O75425 235 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 AP1G2O75843 785 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 HMGA1P17096 107 aaKnown RBP17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 ZNF165P49910 485 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 APBA1Q02410 837 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 TEAD2Q15562 447 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 PHLDB3Q6NSJ2 640 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 GJB7Q6PEY0 223 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 UBR7Q8N806 425 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 KCNK16Q96T55 309 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 BPIFA3Q9BQP9 254 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 SLITRK6Q9H5Y7 841 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 FAM124BQ9H5Z6 455 aaPredicted RBP17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 EPS15L1Q9UBC2 864 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 MUTYHQ9UIF7 546 aa17.84■□□□□ 0.45
TSPAN17-203ENST00000503030 NOL4O94818 638 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 FGF19O95750 216 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 CD19P15391 556 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 PON1P27169 355 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 CYP4F8P98187 520 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 GCNT1Q02742 428 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 IFRD2Q12894 506 aaPredicted RBP17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 PPP1R26Q5T8A7 1209 aaPredicted RBP17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 GAREM2Q75VX8 874 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 DHX40Q8IX18 779 aaKnown RBP17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 JAKMIP2Q96AA8 810 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 SPATA17Q96L03 361 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 C8orf48Q96LL4 319 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 KREMEN1Q96MU8 473 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 HNRNPABQ99729 332 aaKnown RBP17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 IL21Q9HBE4 155 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 DMAP1Q9NPF5 467 aaPredicted RBP17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 APEX2Q9UBZ4 518 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 ZFP37Q9Y6Q3 630 aaPredicted RBP17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 BDP1A6H8Y1 2624 aa17.83■□□□□ 0.44
TSPAN17-203ENST00000503030 SMTNL1A8MU46 457 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 BECN2A8MW95 431 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 MICAL2O94851 1124 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 FAM200BP0CF97 657 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 KRT5P13647 590 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 ACO1P21399 889 aaKnown RBP17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 CDC25CP30307 473 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 MAP3K7CLP57077 242 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 ARHGAP44Q17R89 818 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 STXBP5Q5T5C0 1151 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 POTEHQ6S545 545 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 RBBP8NLQ8NC74 664 aaPredicted RBP17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 RSAD2Q8WXG1 361 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 KHSRPQ92945 711 aaKnown RBP eCLIP17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 SMOQ99835 787 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 HSD3B7Q9H2F3 369 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 UXTQ9UBK9 157 aaPredicted RBP17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 MYH10P35580 1976 aa17.82■□□□□ 0.44
TSPAN17-203ENST00000503030 BEST1O76090 585 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 ZNF18P17022 549 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 COPB1P53618 953 aaKnown RBP17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 MFAP3P55082 362 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 USP46P62068 366 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 GPR158Q5T848 1215 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 TRMT2BQ96GJ1 504 aaKnown RBP17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 ZSWIM3Q96MP5 696 aa17.81■□□□□ 0.44
TSPAN17-203ENST00000503030 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms