RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MTFR1Q15390 333 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 TMEM110Q86TL2 294 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 ACBD3Q9H3P7 528 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 LRRC19Q9H756 370 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 TCRBV7S2A1N4TA0A589 114 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 E5RJQ4 531 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 FNTAP49354 379 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 BCAT1P54687 386 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 BST2Q10589 180 aaKnown RBP23.17■■□□□ 1.3
PTPN13-205ENST00000502971 FAM102AQ5T9C2 384 aaPredicted RBP23.17■■□□□ 1.3
PTPN13-205ENST00000502971 OR6B2Q6IFH4 312 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 POLNQ7Z5Q5 900 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 CCDC50Q8IVM0 306 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 TMEM86AQ8N2M4 240 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 PRDM10Q9NQV6 1147 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 RASAL2Q9UJF2 1139 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 OGDHLQ9ULD0 1010 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 NFU1Q9UMS0 254 aa23.17■■□□□ 1.3
PTPN13-205ENST00000502971 DNM1LO00429 736 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 GABRDO14764 452 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 AFF1P51825 1210 aaKnown RBP23.16■■□□□ 1.3
PTPN13-205ENST00000502971 COPS2P61201 443 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 PMF1Q6P1K2 205 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 TRAF7Q6Q0C0 670 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 FAM183BPQ6ZVS7 135 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 OSTM1Q86WC4 334 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 ZDHHC17Q8IUH5 632 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 DEFB118Q96PH6 123 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 CYLDQ9NQC7 956 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 FAM114A2Q9NRY5 505 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 HCRTO43612 131 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 PAX3P23760 479 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 COILP38432 576 aaPredicted RBP23.16■■□□□ 1.3
PTPN13-205ENST00000502971 PTGIRP43119 386 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 CLCNKBP51801 687 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 PDE4CQ08493 712 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 HADHQ16836 314 aaKnown RBP23.16■■□□□ 1.3
PTPN13-205ENST00000502971 CCDC137Q6PK04 289 aaKnown RBP23.16■■□□□ 1.3
PTPN13-205ENST00000502971 SND1Q7KZF4 910 aaKnown RBP eCLIP23.16■■□□□ 1.3
PTPN13-205ENST00000502971 ECHDC2Q86YB7 292 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 RNF169Q8NCN4 708 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 B3GALNT2Q8NCR0 500 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 SENP8Q96LD8 212 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 OSBPL8Q9BZF1 889 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 RGS18Q9NS28 235 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 HOMER3Q9NSC5 361 aa23.16■■□□□ 1.3
PTPN13-205ENST00000502971 KRT7P08729 469 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 RALAP11233 206 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 CAPN2P17655 700 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 GJC1P36383 396 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 RPL34P49207 117 aaKnown RBP23.15■■□□□ 1.3
PTPN13-205ENST00000502971 GRIK3Q13003 919 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 GPS2Q13227 327 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 UPP1Q16831 310 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 WSCD1Q658N2 575 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 JAMLQ86YT9 394 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 ASNSD1Q9NWL6 643 aa23.15■■□□□ 1.3
PTPN13-205ENST00000502971 INPPL1O15357 1258 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 KRT1P04264 644 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 CCDC130P13994 396 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 TCF4P15884 667 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 ADORA2BP29275 332 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 PTPN7P35236 360 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 LHX1P48742 406 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 RGS7P49802 495 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 ZNF143P52747 638 aaPredicted RBP23.14■■□□□ 1.3
PTPN13-205ENST00000502971 KLF1Q13351 362 aaPredicted RBP23.14■■□□□ 1.3
PTPN13-205ENST00000502971 SMC1AQ14683 1233 aaKnown RBP23.14■■□□□ 1.3
PTPN13-205ENST00000502971 ODF2Q5BJF6 829 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 TTC27Q6P3X3 843 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 ZNF598Q86UK7 904 aaKnown RBP23.14■■□□□ 1.3
PTPN13-205ENST00000502971 EMC1Q8N766 993 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 LPIN3Q9BQK8 851 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 ERP44Q9BS26 406 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 UBXN6Q9BZV1 441 aa23.14■■□□□ 1.3
PTPN13-205ENST00000502971 TULP2O00295 520 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 LRCH4O75427 683 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 RNF8O76064 485 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 GPD1P21695 349 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 ACADSBP45954 432 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 AARSP49588 968 aaKnown RBP eCLIP23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SLC6A3Q01959 620 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 TRADDQ15628 312 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 OLFML1Q6UWY5 402 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 DSTYKQ6XUX3 929 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SLC2A14Q8TDB8 520 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SLCO2A1Q92959 643 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 UROC1Q96N76 676 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SLITRK1Q96PX8 696 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 HNRNPABQ99729 332 aaKnown RBP23.13■■□□□ 1.29
PTPN13-205ENST00000502971 C2CD4BA6NLJ0 364 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 EOMESO95936 686 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 PTPN1P18031 435 aaKnown RBP23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SCNN1AP37088 669 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 DRG2P55039 364 aaKnown RBP23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SLC25A11Q02978 314 aaKnown RBP23.13■■□□□ 1.29
PTPN13-205ENST00000502971 ATP13A4Q4VNC1 1196 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 ZFYVE27Q5T4F4 411 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 DUPD1Q68J44 220 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 CCDC105Q8IYK2 499 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms