RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SDHAF4Q5VUM1 108 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 GJB7Q6PEY0 223 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 LUZP1Q86V48 1076 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 GIPC2Q8TF65 315 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 CYFIP2Q96F07 1278 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 SMARCD1Q96GM5 515 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 ASAH2Q9NR71 780 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.67■■□□□ 1.86
LSM6-202ENST00000502781 F8VP50 259 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 TRIM66O15016 1216 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 MICAL2O94851 1124 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 CSH1P0DML2 217 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 CSH2P0DML3 217 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 ZNF132P52740 706 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 ARHGAP17Q68EM7 881 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 TMEM270Q6UE05 265 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 OTOP3Q7RTS5 596 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 SCN4BQ8IWT1 228 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 GPR152Q8TDT2 470 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 RPGRIP1Q96KN7 1286 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 HEXIM2Q96MH2 286 aaKnown RBP26.66■■□□□ 1.86
LSM6-202ENST00000502781 CSNK1G1Q9HCP0 422 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 ZNF334Q9HCZ1 680 aaPredicted RBP26.66■■□□□ 1.86
LSM6-202ENST00000502781 NR2E1Q9Y466 385 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 A0A0C4DFX4 3053 aa26.66■■□□□ 1.86
LSM6-202ENST00000502781 C2CD4DB7Z1M9 353 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 NRG2O14511 850 aaPredicted RBP26.65■■□□□ 1.86
LSM6-202ENST00000502781 NOL4O94818 638 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 PAEPP09466 180 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 GRIK1P39086 918 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 MFAP3P55082 362 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 FKBP15Q5T1M5 1219 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 CYP4A22Q5TCH4 519 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 PDZD4Q76G19 769 aaPredicted RBP26.65■■□□□ 1.86
LSM6-202ENST00000502781 ITFG1Q8TB96 612 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 MYRFLQ96LU7 910 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 NECAB3Q96P71 396 aaPredicted RBP26.65■■□□□ 1.86
LSM6-202ENST00000502781 MED10Q9BTT4 135 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 IL21Q9HBE4 155 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 PLCB1Q9NQ66 1216 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 KRT82Q9NSB4 513 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 PCDHB4Q9Y5E5 795 aa26.65■■□□□ 1.86
LSM6-202ENST00000502781 RNF225M0QZC1 329 aaPredicted RBP26.64■■□□□ 1.86
LSM6-202ENST00000502781 ZNF197O14709 1029 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 MOSPD3O75425 235 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 PPP1R26Q5T8A7 1209 aaPredicted RBP26.64■■□□□ 1.86
LSM6-202ENST00000502781 KLHDC7AQ5VTJ3 777 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 GAREM2Q75VX8 874 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 ZMIZ2Q8NF64 920 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 SHC3Q92529 594 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 TCEAL4Q96EI5 215 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 TRMT2BQ96GJ1 504 aaKnown RBP26.64■■□□□ 1.86
LSM6-202ENST00000502781 MYADMQ96S97 322 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 UHRF1Q96T88 793 aaPredicted RBP26.64■■□□□ 1.86
LSM6-202ENST00000502781 SMOQ99835 787 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 CD320Q9NPF0 282 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 DMAP1Q9NPF5 467 aaPredicted RBP26.64■■□□□ 1.86
LSM6-202ENST00000502781 KIAA1257Q9ULG3 409 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 SIK3Q9Y2K2 1263 aa26.64■■□□□ 1.86
LSM6-202ENST00000502781 MRPS23Q9Y3D9 190 aaKnown RBP26.64■■□□□ 1.86
LSM6-202ENST00000502781 SLC38A8A6NNN8 435 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 ZNF445P59923 1031 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 MTMR3Q13615 1198 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 GET4Q7L5D6 327 aaPredicted RBP26.63■■□□□ 1.85
LSM6-202ENST00000502781 ZDHHC14Q8IZN3 488 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 TDRD5Q8NAT2 981 aaKnown RBP26.63■■□□□ 1.85
LSM6-202ENST00000502781 RBBP8NLQ8NC74 664 aaPredicted RBP26.63■■□□□ 1.85
LSM6-202ENST00000502781 STKLD1Q8NE28 680 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 FGF13Q92913 245 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 ACSF2Q96CM8 615 aaPredicted RBP26.63■■□□□ 1.85
LSM6-202ENST00000502781 ERGIC2Q96RQ1 377 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 KCNK16Q96T55 309 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 TSPY26PQ9H489 355 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 EPS15L1Q9UBC2 864 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 DNAJC12Q9UKB3 198 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 AJAP1Q9UKB5 411 aaPredicted RBP26.63■■□□□ 1.85
LSM6-202ENST00000502781 CDH7Q9ULB5 785 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 DOCK8Q8NF50 2099 aa26.63■■□□□ 1.85
LSM6-202ENST00000502781 AP1G2O75843 785 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 BEST1O76090 585 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 VDRP11473 427 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 MYL4P12829 197 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 ANXA13P27216 316 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 ADORA2BP29275 332 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 POTEHQ6S545 545 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 DENND5BQ6ZUT9 1274 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 NPAS3Q8IXF0 933 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 GJD3Q8N144 294 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 SHKBP1Q8TBC3 707 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 TTLL2Q9BWV7 592 aa26.62■■□□□ 1.85
LSM6-202ENST00000502781 NAA15Q9BXJ9 866 aaKnown RBP26.62■■□□□ 1.85
LSM6-202ENST00000502781 ZFP37Q9Y6Q3 630 aaPredicted RBP26.62■■□□□ 1.85
LSM6-202ENST00000502781 FGF19O95750 216 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 FAM200BP0CF97 657 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 RFX1P22670 979 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 SP100P23497 879 aaPredicted RBP26.61■■□□□ 1.85
LSM6-202ENST00000502781 SGO2Q562F6 1265 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 CLEC20AQ6ZU45 233 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 TMEM150AQ86TG1 271 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 PLCD3Q8N3E9 789 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms