RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	ZCWPW1	Q9H0M4	648 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	FAM49B	Q9NUQ9	324 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	GTF3C4	Q9UKN8	822 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	DUSP10	Q9Y6W6	482 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	TCRBV5S1A1T	A0A578	114 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	LCHN	A4D1U4	455 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.86	□□□□□ -0.35
MATR3-231	ENST00000502394		M0QYV0	167 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	KRT86	O43790	486 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	SOD2	P04179	222 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	GABRB2	P47870	512 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	BCAT1	P54687	386 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	HADHB	P55084	474 aa	Known RBP	12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	KIF5A	Q12840	1032 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	PTPN20	Q4JDL3	420 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	MDH1B	Q5I0G3	518 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	FAM35A	Q86V20	835 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	GPR65	Q8IYL9	337 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	THEM5	Q8N1Q8	247 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	FIBCD1	Q8N539	461 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	SLC2A14	Q8TDB8	520 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	STK32A	Q8WU08	396 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	SLC35F5	Q8WV83	523 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	PIK3R5	Q8WYR1	880 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	RFFL	Q8WZ73	363 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	SECISBP2L	Q93073	1101 aa	Known RBP	12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	PCED1B	Q96HM7	432 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	TTPAL	Q9BTX7	342 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	THAP2	Q9H0W7	228 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	PDCL3	Q9H2J4	239 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	AVEN	Q9NQS1	362 aa	Predicted RBP	12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	TMLHE	Q9NVH6	421 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	SPG21	Q9NZD8	308 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	CEP83	Q9Y592	693 aa		12.86	□□□□□ -0.35
MATR3-231	ENST00000502394	OR6C75	A6NL08	312 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	TULP2	O00295	520 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	CLDN5	O00501	218 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	MTA2	O94776	668 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	MYBL1	P10243	752 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	PPM1A	P35813	382 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	NSF	P46459	744 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	GPC5	P78333	572 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	PDE4C	Q08493	712 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	BST2	Q10589	180 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	PDCL	Q13371	301 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	SHH	Q15465	462 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	USP41	Q3LFD5	358 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	ARHGAP29	Q52LW3	1261 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	C6orf132	Q5T0Z8	1188 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	ZNF280D	Q6N043	979 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	ANKS3	Q6ZW76	656 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	DDX53	Q86TM3	631 aa	Known RBP	12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	UBA3	Q8TBC4	463 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	MYLPF	Q96A32	169 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	B3GALT6	Q96L58	329 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	CPXM1	Q96SM3	734 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	DUSP16	Q9BY84	665 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	LZTFL1	Q9NQ48	299 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	TMEM30A	Q9NV96	361 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	MTRR	Q9UBK8	725 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	TJP2	Q9UDY2	1190 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	BACE2	Q9Y5Z0	518 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	NLRC5	Q86WI3	1866 aa		12.85	□□□□□ -0.35
MATR3-231	ENST00000502394	PTPRD	P23468	1912 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394		H7C4K7	107 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	XPO1	O14980	1071 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	FANCG	O15287	622 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	TLL1	O43897	1013 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	ARHGEF15	O94989	841 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	NPR3	P17342	541 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	ABCB4	P21439	1286 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	ADORA2B	P29275	332 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	PLA2G4A	P47712	749 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	TSPY1	Q01534	308 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	DSG1	Q02413	1049 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	MAPRE1	Q15691	268 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	CTXN3	Q4LDR2	81 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	SPOUT1	Q5T280	376 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	PLEKHA7	Q6IQ23	1121 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	PMF1	Q6P1K2	205 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	MMS22L	Q6ZRQ5	1243 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	CLEC20A	Q6ZU45	233 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	TMEM110	Q86TL2	294 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	RNF10	Q8N5U6	811 aa	Known RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	ZMIZ2	Q8NF64	920 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	ZNF653	Q96CK0	615 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	TRIM11	Q96F44	468 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	TMEM169	Q96HH4	297 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	SMO	Q99835	787 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	C11orf70	Q9BRQ4	267 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	IRX2	Q9BZI1	471 aa	Predicted RBP	12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	CSNK1G1	Q9HCP0	422 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	CYLD	Q9NQC7	956 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	AAAS	Q9NRG9	546 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	ADAM22	Q9P0K1	906 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	MYO1A	Q9UBC5	1043 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms