RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
NEAT1-201ENST00000499732 CGB2Q6NT52 195 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 MCOLN2Q8IZK6 566 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 GDAP1Q8TB36 358 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 ATG4AQ8WYN0 398 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 ZNF668Q96K58 619 aaPredicted RBP15.29■□□□□ 0.04
NEAT1-201ENST00000499732 FZD8Q9H461 694 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.048e-16■■□□□ 13.5
NEAT1-201ENST00000499732 TXLNGQ9NUQ3 528 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 ANK1P16157 1881 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 CNTNAP2Q9UHC6 1331 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 UNC5CO95185 931 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 MBTD1Q05BQ5 628 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 ZACNQ401N2 412 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 LMBRD2Q68DH5 695 aaPredicted RBP15.29■□□□□ 0.04
NEAT1-201ENST00000499732 RMDN2Q96LZ7 410 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 NFKBIZQ9BYH8 718 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
NEAT1-201ENST00000499732 SPC25Q9HBM1 224 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 GGT7Q9UJ14 662 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 NAALADL1Q9UQQ1 740 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 STARD13Q9Y3M8 1113 aa15.29■□□□□ 0.04
NEAT1-201ENST00000499732 FAM47DPA6NHR8 397 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 ACKR2O00590 384 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 PROSCO94903 275 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 C4BPAP04003 597 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 RPSAP08865 295 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 RARBP10826 455 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 HARSP12081 509 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 TAC1P20366 129 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 PROZP22891 400 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 CCNG1P51959 295 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 MCL1Q07820 350 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 ZKSCAN8Q15776 578 aaPredicted RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 IZUMO3Q5VZ72 239 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 MTHFD1LQ6UB35 978 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 RGS9BPQ6ZS82 235 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 TDRPQ86YL5 185 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 SRRM1Q8IYB3 904 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 CYP4X1Q8N118 509 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 ZCCHC9Q8N567 271 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 DHX38Q92620 1227 aaKnown RBP15.28■□□□□ 0.04
NEAT1-201ENST00000499732 TTC25Q96NG3 672 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 KATNAL1Q9BW62 490 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 MINDY3Q9H8M7 445 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 IFT122Q9HBG6 1241 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 PTPRHQ9HD43 1115 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 L3MBTL1Q9Y468 752 aa15.28■□□□□ 0.04
NEAT1-201ENST00000499732 HAS3O00219 553 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.048e-50■■■□□ 17.5
NEAT1-201ENST00000499732 KRT5P13647 590 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 TNNI1P19237 187 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 RRM1P23921 792 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 BPIFB4P59827 614 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 MGAT5Q09328 741 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 MFSD10Q14728 455 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 GRIK4Q16099 956 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 PARP6Q2NL67 630 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 MAP3K21Q5TCX8 1036 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.04
NEAT1-201ENST00000499732 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 ZBTB33Q86T24 672 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 RHOT1Q8IXI2 618 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 KATNAL2Q8IYT4 538 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.04
NEAT1-201ENST00000499732 DPF3Q92784 378 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 CFAP57Q96MR6 1250 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 CGRRF1Q99675 332 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 HERPUD2Q9BSE4 406 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 PITPNM3Q9BZ71 974 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 MLXIPLQ9NP71 852 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 SENP1Q9P0U3 644 aa15.27■□□□□ 0.04
NEAT1-201ENST00000499732 UMODL1Q5DID0 1318 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 NRCAMQ92823 1304 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 RASA4BC9J798 803 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 INO80B-WBP1J3KQ70 363 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 B4GALT5O43286 388 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 RASA4O43374 803 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 CYP1A1P04798 512 aaPredicted RBP15.27■□□□□ 0.03
NEAT1-201ENST00000499732 MYL3P08590 195 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 C6orf222P0C671 652 aaPredicted RBP15.27■□□□□ 0.03
NEAT1-201ENST00000499732 IQCF3P0C7M6 154 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 CCND3P30281 292 aaPredicted RBP15.27■□□□□ 0.03
NEAT1-201ENST00000499732 TNFSF9P41273 254 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 PSEN2P49810 448 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 YARSP54577 528 aaKnown RBP15.27■□□□□ 0.03
NEAT1-201ENST00000499732 PURAQ00577 322 aaKnown RBP15.27■□□□□ 0.03
NEAT1-201ENST00000499732 BEX3Q00994 111 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 POU5F1BQ06416 359 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 NAA25Q14CX7 972 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 TRIP13Q15645 432 aaPredicted RBP15.27■□□□□ 0.03
NEAT1-201ENST00000499732 SPDYAQ5MJ70 313 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 MARCH8Q5T0T0 291 aa15.27■□□□□ 0.03
NEAT1-201ENST00000499732 ECHDC2Q86YB7 292 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms