RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TNK2Q07912 1038 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 ZNF667Q5HYK9 610 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 MAML2Q8IZL2 1156 aaPredicted RBP17.19■□□□□ 0.34
NR1H3-227ENST00000498548 GUF1Q8N442 669 aaKnown RBP17.19■□□□□ 0.34
NR1H3-227ENST00000498548 TTC16Q8NEE8 873 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 RIN3Q8TB24 985 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 TMC2Q8TDI7 906 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 TMEM174Q8WUU8 243 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 USP13Q92995 863 aaPredicted RBP17.19■□□□□ 0.34
NR1H3-227ENST00000498548 EEF2KMTQ96G04 330 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 NELL2Q99435 816 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 B3GNT5Q9BYG0 378 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 GKN1Q9NS71 199 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 MRPS17Q9Y2R5 130 aaKnown RBP17.19■□□□□ 0.34
NR1H3-227ENST00000498548 R4GN57 208 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 PATJQ8NI35 1801 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 FAM163BP0C2L3 166 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 SP9P0CG40 484 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 WEE1P30291 646 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 AVPR1AP37288 418 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 USP46P62068 366 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ORC1Q13415 861 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ADAM9Q13443 819 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 MAPRE1Q15691 268 aaKnown RBP17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ZACNQ401N2 412 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 VSTM1Q6UX27 236 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 MON1AQ86VX9 555 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ZNF687Q8N1G0 1237 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ENGASEQ8NFI3 743 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 CLDN23Q96B33 292 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 MYRFLQ96LU7 910 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 SLC22A12Q96S37 553 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 LMAN1LQ9HAT1 526 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 TMEM30AQ9NV96 361 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 OBP2AQ9NY56 170 aa17.18■□□□□ 0.34
NR1H3-227ENST00000498548 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
NR1H3-227ENST00000498548 PROB1E7EW31 1015 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 F8VP50 259 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 NCAM2O15394 837 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 LAMTOR5O43504 91 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 HLA-DRAP01903 254 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 DDX6P26196 483 aaKnown RBP eCLIP17.17■□□□□ 0.34
NR1H3-227ENST00000498548 ANXA13P27216 316 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 GCLMP48507 274 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 PPP3CAQ08209 521 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 NFIL3Q16649 462 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 TRIM68Q6AZZ1 485 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 ISM2Q6H9L7 571 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 FAM186BQ8IYM0 893 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 ARL14EPQ8N8R7 260 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-227ENST00000498548 B3GALNT2Q8NCR0 500 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 TRMT2BQ96GJ1 504 aaKnown RBP17.17■□□□□ 0.34
NR1H3-227ENST00000498548 SPATA17Q96L03 361 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 TDP1Q9NUW8 608 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 CACNA1HO95180 2353 aa17.17■□□□□ 0.34
NR1H3-227ENST00000498548 C2orf78A6NCI8 922 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 PSMC2P35998 433 aaKnown RBP17.16■□□□□ 0.34
NR1H3-227ENST00000498548 PIK3CAP42336 1068 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 PRCPP42785 496 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 CSTF1Q05048 431 aaKnown RBP17.16■□□□□ 0.34
NR1H3-227ENST00000498548 IFRD2Q12894 506 aaPredicted RBP17.16■□□□□ 0.34
NR1H3-227ENST00000498548 SGSM1Q2NKQ1 1148 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 TXNDC11Q6PKC3 985 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 TSSK4Q6SA08 328 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 ACOT1Q86TX2 421 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 MED10Q9BTT4 135 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 RBM12Q9NTZ6 932 aaKnown RBP17.16■□□□□ 0.34
NR1H3-227ENST00000498548 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
NR1H3-227ENST00000498548 PCDHA5Q9Y5H7 936 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 MYH10P35580 1976 aa17.16■□□□□ 0.34
NR1H3-227ENST00000498548 F5P12259 2224 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 PRR23AA6NEV1 266 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 SPECC1L-ADORA2AF8WAN1 911 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 IKBKBO14920 756 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 TRIM66O15016 1216 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 MAPK13O15264 365 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 CHRNB1P11230 501 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 KRT13P13646 458 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 ARSAP15289 507 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 RPL13P26373 211 aaKnown RBP17.15■□□□□ 0.34
NR1H3-227ENST00000498548 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 MTAPQ13126 283 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 PON2Q15165 354 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 DENND5BQ6ZUT9 1274 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 PAQR9Q6ZVX9 377 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 NKD2Q969F2 451 aaPredicted RBP17.15■□□□□ 0.34
NR1H3-227ENST00000498548 C8orf48Q96LL4 319 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 KCNK16Q96T55 309 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 EBF3Q9H4W6 596 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 C8orf33Q9H7E9 229 aaPredicted RBP17.15■□□□□ 0.34
NR1H3-227ENST00000498548 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
NR1H3-227ENST00000498548 HPS4Q9NQG7 708 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms