RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 TOR1BO14657 336 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 PCDH17O14917 1159 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 NUAK1O60285 661 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 ERN1O75460 977 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 SPATA31D3P0C874 917 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 CYP2C9P11712 490 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 MST1P26927 711 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 NTSR1P30989 418 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 GCLCP48506 637 aaPredicted RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 PNLIPRP1P54315 467 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 ALDH18A1P54886 795 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 HSD11B2P80365 405 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 SATB1Q01826 763 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 NHLH2Q02577 135 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 ZNF844Q08AG5 666 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 GPS1Q13098 491 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 KCNA10Q16322 511 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 PTCHD3Q3KNS1 767 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 ADCK5Q3MIX3 580 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 MFSD5Q6N075 450 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 MZT2AQ6P582 158 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 TMEM108Q6UXF1 575 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 SPATA31D4Q6ZUB0 917 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 RSRC2Q7L4I2 434 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 LRRTM4Q86VH4 590 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 D2HGDHQ8N465 521 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 ESX1Q8N693 406 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 IL17REQ8NFR9 667 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 OR52N2Q8NGI0 321 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 SCAMP5Q8TAC9 235 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 NUP133Q8WUM0 1156 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 PPP2R3CQ969Q6 453 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 SEC62Q99442 399 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 NEU1Q99519 415 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 PYM1Q9BRP8 204 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 SLC26A6Q9BXS9 759 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 SLC46A2Q9BY10 475 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 DHX36Q9H2U1 1008 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 NELFAQ9H3P2 528 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 CXorf36Q9H7Y0 433 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 SEPSECSQ9HD40 501 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 CD320Q9NPF0 282 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 RIC8AQ9NPQ8 531 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 PLA2G3Q9NZ20 509 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 PDP2Q9P2J9 529 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 DNMT3BQ9UBC3 853 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 HSFX1Q9UBD0 423 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 HERC5Q9UII4 1024 aaKnown RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 USP15Q9Y4E8 981 aaPredicted RBP4.24□□□□□ -1.73
CALD1-224ENST00000498254 CDY1Q9Y6F8 540 aa4.24□□□□□ -1.73
CALD1-224ENST00000498254 CCDC195A0A1B0GUA6 201 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 A0A1B0GVC2 190 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 PMS2P1A4D2B8 440 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 J3KTA2 159 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 CCP110O43303 1012 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 KCNQ3O43525 872 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 NOBOXO60393 691 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 MFAP3LO75121 409 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 KRT38O76015 456 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 IPO13O94829 963 aaKnown RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 MBD4O95243 580 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 INHBBP09529 407 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 ATXN1LP0C7T5 689 aaKnown RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 HGFP14210 728 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 GCSHP23434 173 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 MGAT1P26572 445 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 APOBEC3AP31941 199 aaPredicted RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 KCNC1P48547 511 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 BCAT1P54687 386 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 PPP2CBP62714 309 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 AP2B1P63010 937 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 PPP2CAP67775 309 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 CAP1Q01518 475 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 NSUN2Q08J23 767 aaKnown RBP eCLIP4.23□□□□□ -1.73
CALD1-224ENST00000498254 MYO1EQ12965 1108 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 SURF1Q15526 300 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 SLC5A9Q2M3M2 681 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 ZNF750Q32MQ0 723 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 PREPLQ4J6C6 727 aaPredicted RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 ARHGAP40Q5TG30 622 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 TANGO2Q6ICL3 276 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 MRNIPQ6NTE8 343 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 FAM180BQ6P0A1 224 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 USP17L6PQ6QN14 398 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 PLEKHH3Q7Z736 793 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 TMTC1Q8IUR5 882 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 RASGRP3Q8IV61 690 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 SYT8Q8NBV8 401 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 OTUD7AQ8TE49 926 aaPredicted RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 GOLGA1Q92805 767 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 ZBTB45Q96K62 511 aaPredicted RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 PPM1MQ96MI6 270 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 RTKNQ9BST9 563 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 REXO4Q9GZR2 422 aaKnown RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 MEGF9Q9H1U4 602 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 GBA2Q9HCG7 927 aaPredicted RBP4.23□□□□□ -1.73
CALD1-224ENST00000498254 SAYSD1Q9NPB0 183 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 FAM30AQ9NZY2 134 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 DKK4Q9UBT3 224 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms