RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ATP10AO60312 1499 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 RALGAPBQ86X10 1494 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 ZNF608Q9ULD9 1512 aaPredicted RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 CEP170Q5SW79 1584 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 KDM6BO15054 1643 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 LAMC1P11047 1609 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 CFAP69A5D8W1 941 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 GOLIM4O00461 696 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 KIF3BO15066 747 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 VPS4BO75351 444 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 NXPH3O95157 252 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 NPR1P16066 1061 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 SLC7A1P30825 629 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 SLC11A2P49281 568 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 PRR16Q569H4 304 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 PLAC9Q5JTB6 97 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 RBM20Q5T481 1227 aaKnown RBP5.87□□□□□ -1.47
SSR3-209ENST00000498205 STRIP1Q5VSL9 837 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 OLFML1Q6UWY5 402 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 CCDC149Q6ZUS6 474 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 GRASPQ7Z6J2 395 aaPredicted RBP5.87□□□□□ -1.47
SSR3-209ENST00000498205 TOR1AIP2Q8NFQ8 470 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 LRTOMTQ8WZ04 291 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 PBKQ96KB5 322 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 PTDSS2Q9BVG9 487 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 ZNF518BQ9C0D4 1074 aa5.87□□□□□ -1.47
SSR3-209ENST00000498205 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.87□□□□□ -1.47
SSR3-209ENST00000498205 RGS17Q9UGC6 210 aaPredicted RBP5.87□□□□□ -1.47
SSR3-209ENST00000498205 FRMPD2Q68DX3 1309 aaPredicted RBP5.87□□□□□ -1.47
SSR3-209ENST00000498205 ERCC6Q03468 1493 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 PLEKHH2Q8IVE3 1493 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 ANKRD50Q9ULJ7 1429 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 A0A087WWL8 130 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
SSR3-209ENST00000498205 MYO1FO00160 1098 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 BTN3A1O00481 513 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 TPP1O14773 563 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 TLR5O60602 858 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 KITP10721 976 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 HSPA5P11021 654 aaKnown RBP5.86□□□□□ -1.47
SSR3-209ENST00000498205 GRIA3P42263 894 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 RARRES1P49788 294 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
SSR3-209ENST00000498205 SOX10P56693 466 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 COL10A1Q03692 680 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 SLC13A2Q13183 592 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 E2F2Q14209 437 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 MGAT5BQ3V5L5 792 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 RNF220Q5VTB9 566 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 TMEM108Q6UXF1 575 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 DGKHQ86XP1 1220 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 MYCBPAPQ8TBZ2 947 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 ATRIPQ8WXE1 791 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 LPIN2Q92539 896 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 PDLIM2Q96JY6 352 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 DUSP26Q9BV47 211 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 C22orf23Q9BZE7 217 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 AMBRA1Q9C0C7 1298 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 PRKRIP1Q9H875 184 aaPredicted RBP5.86□□□□□ -1.47
SSR3-209ENST00000498205 ATP6V0A4Q9HBG4 840 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 EHD3Q9NZN3 535 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 CHPF2Q9P2E5 772 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 C11orf21Q9P2W6 132 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 TLK1Q9UKI8 766 aa5.86□□□□□ -1.47
SSR3-209ENST00000498205 CDC42BPAQ5VT25 1732 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 KDM5CP41229 1560 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 GPRASP1Q5JY77 1395 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
SSR3-209ENST00000498205 ONECUT2O95948 504 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 UCP3P55916 312 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 DTX2Q86UW9 622 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 GAS2L3Q86XJ1 694 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 DNAJC5GQ8N7S2 189 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 NMD3Q96D46 503 aaKnown RBP5.85□□□□□ -1.47
SSR3-209ENST00000498205 ZG16BQ96DA0 208 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 P2RX7Q99572 595 aaKnown RBP5.85□□□□□ -1.47
SSR3-209ENST00000498205 ACTRT3Q9BYD9 372 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 SMOC2Q9H3U7 446 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 A1CFQ9NQ94 594 aaKnown RBP5.85□□□□□ -1.47
SSR3-209ENST00000498205 FOXJ2Q9P0K8 574 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 SLC17A6Q9P2U8 582 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 ZNHIT2Q9UHR6 403 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 SH2B3Q9UQQ2 575 aa5.85□□□□□ -1.47
SSR3-209ENST00000498205 PLXNC1O60486 1568 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 NEURL4Q96JN8 1562 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 ARAP3Q8WWN8 1544 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 MAGI2Q86UL8 1455 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 RNF123Q5XPI4 1314 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 FANCIQ9NVI1 1328 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 WDR27A2RRH5 827 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 PPFIA2O75334 1257 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 PARNO95453 639 aaKnown RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 MYF5P13349 255 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 RHCEP18577 417 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 CHRM3P20309 590 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms