RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TMX2Q9Y320 296 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 F5H697 171 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 URI1O94763 535 aaPredicted RBP4.01□□□□□ -1.77
PSPC1-205ENST00000497722 LATS1O95835 1130 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 CELA2AP08217 269 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 JUPP14923 745 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 RHCEP18577 417 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 AGFG1P52594 562 aaKnown RBP4.01□□□□□ -1.77
PSPC1-205ENST00000497722 SUMO3P55854 103 aaPredicted RBP4.01□□□□□ -1.77
PSPC1-205ENST00000497722 SSBP2P81877 361 aaPredicted RBP4.01□□□□□ -1.77
PSPC1-205ENST00000497722 RHDQ02161 417 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 SLC13A2Q13183 592 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 FAM160B1Q5W0V3 765 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 FCRLBQ6BAA4 426 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
PSPC1-205ENST00000497722 SERHLQ9NQF3 203 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.01□□□□□ -1.77
PSPC1-205ENST00000497722 SERGEFQ9UGK8 458 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 L1RE1Q9UN81 338 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 ST3GAL5Q9UNP4 418 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 PLEKHM1Q9Y4G2 1056 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 RAD54BQ9Y620 910 aa4.01□□□□□ -1.77
PSPC1-205ENST00000497722 MANSC4A6NHS7 340 aaPredicted RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 RHPN2P1A8MT19 583 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 BTN3A1O00481 513 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 TRIAP1O43715 76 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 RASSF9O75901 435 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 PRKCGP05129 697 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 THP07101 528 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 MYL3P08590 195 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 XRCC6P12956 609 aaKnown RBP eCLIP4□□□□□ -1.77
PSPC1-205ENST00000497722 DRD4P21917 467 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 KRT17Q04695 432 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 SRSF4Q08170 494 aaKnown RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 IFIT5Q13325 482 aaKnown RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 HDAC1Q13547 482 aaPredicted RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 BRD3Q15059 726 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 RBM20Q5T481 1227 aaKnown RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 EMC10Q5UCC4 262 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 VPS53Q5VIR6 699 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 CCSAPQ6IQ19 270 aaPredicted RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 CHST15Q7LFX5 561 aaPredicted RBP4□□□□□ -1.77
PSPC1-205ENST00000497722 AMIGO2Q86SJ2 522 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 RASAL3Q86YV0 1011 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 KIAA0319LQ8IZA0 1049 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 SLC15A4Q8N697 577 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 SEMA6DQ8NFY4 1073 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 IL31RAQ8NI17 732 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 TNIP3Q96KP6 325 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 HAPLN3Q96S86 360 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 SARGQ9BW04 601 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 ACTRT3Q9BYD9 372 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 PNPLA8Q9NP80 782 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 EHD3Q9NZN3 535 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 FLRT1Q9NZU1 646 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 HDAC9Q9UKV0 1011 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 WNT6Q9Y6F9 365 aa4□□□□□ -1.77
PSPC1-205ENST00000497722 A6NNZ2 444 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF213O14771 459 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 NR2F6P10588 404 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 PIM1P11309 404 aaPredicted RBP3.99□□□□□ -1.77
PSPC1-205ENST00000497722 NPR1P16066 1061 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 IQCB1Q15051 598 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 CNGA2Q16280 664 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 LONRF3Q496Y0 759 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 APOA5Q6Q788 366 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 DTX2Q86UW9 622 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 CCDC33Q8N5R6 958 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 DNAJC5GQ8N7S2 189 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 ACRBPQ8NEB7 543 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 SMCR8Q8TEV9 937 aaPredicted RBP3.99□□□□□ -1.77
PSPC1-205ENST00000497722 KBTBD7Q8WVZ9 684 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 IPCEF1Q8WWN9 437 aaPredicted RBP3.99□□□□□ -1.77
PSPC1-205ENST00000497722 RAPGEF4Q8WZA2 1011 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 FKBP10Q96AY3 582 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 FAM136AQ96C01 138 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 REPS1Q96D71 796 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF778Q96MU6 729 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 SLC46A1Q96NT5 459 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 STK31Q9BXU1 1019 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 TPSD1Q9BZJ3 242 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 BHMT2Q9H2M3 363 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 CPNE7Q9UBL6 633 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 AFF4Q9UHB7 1163 aaKnown RBP3.99□□□□□ -1.77
PSPC1-205ENST00000497722 ITGB1BP2Q9UKP3 347 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 CORO2BQ9UQ03 480 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 SHOC2Q9UQ13 582 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 PAXBP1Q9Y5B6 917 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 KAT6AQ92794 2004 aa3.99□□□□□ -1.77
PSPC1-205ENST00000497722 USP19O94966 1318 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 LINC01548A6NM66 108 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ISM1B1AKI9 464 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 DCLK1O15075 740 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 DNAJB5O75953 348 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 TTLL1O95922 423 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 HRGP04196 525 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 IFIT2P09913 472 aaKnown RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ATXN1LP0C7T5 689 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms