RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ICA1Q05084 483 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 GRM1Q13255 1194 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 IQCB1Q15051 598 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 GEN1Q17RS7 908 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 INSCQ1MX18 579 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 DCAF12L1Q5VU92 463 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 UNC13DQ70J99 1090 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 LCORLQ8N3X6 602 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 CCDC150Q8NCX0 1101 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 NSUN7Q8NE18 718 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 OR56A3Q8NH54 315 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 FUBP1Q96AE4 644 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 PPP1R9BQ96SB3 815 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 VKORC1Q9BQB6 163 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 HEPHQ9BQS7 1158 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 CHST8Q9H2A9 424 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 CYP4F11Q9HBI6 524 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 HESX1Q9UBX0 185 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 CDC23Q9UJX2 597 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 MAGED2Q9UNF1 606 aaPredicted RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 DMRT1Q9Y5R6 373 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 A0A087WV62 115 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 CCDC195A0A1B0GUA6 201 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 LOC102723971A0A1B0GUV8 181 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 E7ENX8 843 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 CCP110O43303 1012 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 GCP02774 474 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 IDEP14735 1019 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 IL1R2P27930 398 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 IL6STP40189 918 aaPredicted RBP4.81□□□□□ -1.64
SMC4-225ENST00000497203 VAV2P52735 878 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 TAP2Q03519 686 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 SLC29A2Q14542 456 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 MPEG1Q2M385 716 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 SLC35G1Q2M3R5 365 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 C4orf46Q504U0 113 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 INO80DQ53TQ3 878 aaPredicted RBP4.81□□□□□ -1.64
SMC4-225ENST00000497203 HSP90AB4PQ58FF6 505 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 HECTD2Q5U5R9 776 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 ABHD17BQ5VST6 288 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
SMC4-225ENST00000497203 TAPT1Q6NXT6 567 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 GAS2L3Q86XJ1 694 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 GPR150Q8NGU9 434 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 LRIG1Q96JA1 1093 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 TRIB1Q96RU8 372 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 TTLL2Q9BWV7 592 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 STK33Q9BYT3 514 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 DHX36Q9H2U1 1008 aaKnown RBP4.81□□□□□ -1.64
SMC4-225ENST00000497203 UNKLQ9H9P5 680 aaKnown RBP4.81□□□□□ -1.64
SMC4-225ENST00000497203 XPNPEP3Q9NQH7 507 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 TM7SF3Q9NS93 570 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 ETAA1Q9NY74 926 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 CTTNBP2NLQ9P2B4 639 aa4.81□□□□□ -1.64
SMC4-225ENST00000497203 EPN1Q9Y6I3 576 aaPredicted RBP4.81□□□□□ -1.64
SMC4-225ENST00000497203 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 MYADML2A6NDP7 307 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 GOLGA6L3A6NEY3 463 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 TMEM233B4DJY2 109 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 FFAR2O15552 330 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 PLA2G6O60733 806 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 SKAP2O75563 359 aaPredicted RBP4.8□□□□□ -1.64
SMC4-225ENST00000497203 IL1R1P14778 569 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 TYRP1P17643 537 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 TGM1P22735 817 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 ACVR2AP27037 513 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 LRPAP1P30533 357 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 LOXL3P58215 753 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 TAP1Q03518 808 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 COL10A1Q03692 680 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 FOXI1Q12951 378 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 BLMHQ13867 455 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 TRIM14Q14142 442 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 MGAT5BQ3V5L5 792 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 ANKRD42Q8N9B4 389 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 ZNF527Q8NB42 609 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 CYP2W1Q8TAV3 490 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 PPM1EQ8WY54 764 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 LTV1Q96GA3 475 aaPredicted RBP4.8□□□□□ -1.64
SMC4-225ENST00000497203 SLC46A1Q96NT5 459 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 MAGEB5Q9BZ81 275 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 TESQ9UGI8 421 aaKnown RBP4.8□□□□□ -1.64
SMC4-225ENST00000497203 MID2Q9UJV3 735 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 PACSIN3Q9UKS6 424 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.8□□□□□ -1.64
SMC4-225ENST00000497203 RAD54BQ9Y620 910 aa4.8□□□□□ -1.64
SMC4-225ENST00000497203 A0A1W2PS29 197 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 VPS4BO75351 444 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 HKR1P10072 659 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 KCNA2P16389 499 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
SMC4-225ENST00000497203 ITGALP20701 1170 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 HALP42357 657 aa4.79□□□□□ -1.64
SMC4-225ENST00000497203 ALDH9A1P49189 494 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms