RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 NRSN1Q8IZ57 195 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF619Q8N2I2 560 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CAMKK1Q8N5S9 505 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 C19orf47Q8N9M1 422 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 PCSK9Q8NBP7 692 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 RCBTB1Q8NDN9 531 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MAGEC3Q8TD91 643 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 COG1Q8WTW3 980 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 HDAC2Q92769 488 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SMARCE1Q969G3 411 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CHFRQ96EP1 664 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 HS6ST2Q96MM7 605 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SEC62Q99442 399 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 COQ7Q99807 217 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MYD88Q99836 296 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GAL3ST1Q99999 423 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 INTS2Q9H0H0 1204 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 EPB41L4BQ9H329 900 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 C8orf4Q9NR00 106 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SUCLA2Q9P2R7 463 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 HMGXB4Q9UGU5 601 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ZMYM3Q14202 1370 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MAP3K5Q99683 1374 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ADGRL1O94910 1474 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 LOC105371267A0A1B0GV96 52 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 A0A1W2PQJ5 194 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 LRRD1A4D1F6 860 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GOLGA8IPA6NC78 632 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RRN3P2A6NIE6 340 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GOLGA8JA6NMD2 632 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 LRRIQ3A6PVS8 624 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GOLGA8TH3BQL2 631 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 STX16-NPEPL1H3BU86 382 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KRIT1O00522 736 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RIPK2O43353 540 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RFPL1O75677 317 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PALMO75781 387 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SLITRK3O94933 977 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 LTA4HP09960 611 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GOLGA8HP0CJ92 632 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PF4V1P10720 104 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RPS6KB1P23443 525 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 THOP1P52888 689 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 AK2P54819 239 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MYL6P60660 151 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 BEX3Q00994 111 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CAP1Q01518 475 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CUL1Q13616 776 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 FRG1Q14331 258 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ANO4Q32M45 955 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PABPC1LQ4VXU2 614 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 HABP4Q5JVS0 413 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CXorf57Q6NSI4 855 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RETSATQ6NUM9 610 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MIS18BP1Q6P0N0 1132 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGAP11AQ6P4F7 1023 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 C11orf88Q6PI97 169 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CWC27Q6UX04 472 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 OLFM4Q6UX06 510 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF704Q6ZNC4 412 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 NKAIN4Q8IVV8 208 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TRIM59Q8IWR1 403 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PALM2Q8IXS6 379 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PPIL6Q8IXY8 311 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ZDHHC14Q8IZN3 488 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RFWD2Q8NHY2 731 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KLHDC4Q8TBB5 520 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CASP10Q92851 521 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ART5Q96L15 291 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TCEANC2Q96MN5 208 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KCNJ15Q99712 375 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PI4K2AQ9BTU6 479 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MXD3Q9BW11 206 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TARS2Q9BW92 718 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MYLK2Q9H1R3 596 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 NKX2-4Q9H2Z4 354 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC39A1Q9NY26 324 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KLHL14Q9P2G3 628 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 IFT80Q9P2H3 777 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MBD2Q9UBB5 411 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 AMACRQ9UHK6 382 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CRYL1Q9Y2S2 319 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GPR52Q9Y2T5 361 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MED16Q9Y2X0 877 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TNKSO95271 1327 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ITIH6Q6UXX5 1313 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC12A8A0AV02 714 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TRIM75PA6NK02 468 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GOLGA8SH3BPF8 625 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MASP2O00187 686 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 POLR2DO15514 142 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GUCY1B2O75343 617 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 DNAJC8O75937 253 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 USP1O94782 785 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 LTFP02788 710 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MYBP10242 640 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 GNAT1P11488 350 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 AKR1B1P15121 316 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms