RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	DPF1	Q92782	380 aa		7.41	□□□□□ -1.22
TARDBP-210	ENST00000496840	CXorf36	Q9H7Y0	433 aa		7.41	□□□□□ -1.22
TARDBP-210	ENST00000496840	SERGEF	Q9UGK8	458 aa		7.41	□□□□□ -1.22
TARDBP-210	ENST00000496840	EID1	Q9Y6B2	187 aa		7.41	□□□□□ -1.22
TARDBP-210	ENST00000496840	CAPN8	A6NHC0	703 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	MANSC4	A6NHS7	340 aa	Predicted RBP	7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	LINC01548	A6NM66	108 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	ZNF213	O14771	459 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	MARCH6	O60337	910 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	TJP3	O95049	919 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	KIT	P10721	976 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	CDK4	P11802	303 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	DGKE	P52429	567 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	TFF2	Q03403	129 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	SLC29A4	Q7RTT9	530 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	ZNF280B	Q86YH2	543 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	SLC15A3	Q8IY34	581 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	GLG1	Q92896	1179 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	REPS1	Q96D71	796 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	SUCLG2	Q96I99	432 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	SMURF2	Q9HAU4	748 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	DUSP22	Q9NRW4	184 aa		7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840	NOB1	Q9ULX3	412 aa	Known RBP	7.4	□□□□□ -1.22
TARDBP-210	ENST00000496840		A1L4Q6	167 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	hCG_1984214	I3L0E3	225 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	MYO1F	O00160	1098 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	QSOX1	O00391	747 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	PRPF3	O43395	683 aa	Known RBP	7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	FRS3	O43559	492 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	FES	P07332	822 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	CYP2C18	P33260	490 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	EEFSEC	P57772	596 aa	Known RBP	7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	SLC10A2	Q12908	348 aa	Predicted RBP	7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	SLC13A2	Q13183	592 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	RAB32	Q13637	225 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	LRRC41	Q15345	812 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	ZIK1	Q3SY52	487 aa	Predicted RBP	7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	SOCS4	Q8WXH5	440 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	FSD1L	Q9BXM9	530 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	C22orf23	Q9BZE7	217 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	FLRT1	Q9NZU1	646 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	L1RE1	Q9UN81	338 aa		7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	MRPS17	Q9Y2R5	130 aa	Known RBP	7.39	□□□□□ -1.23
TARDBP-210	ENST00000496840	INO80B-WBP1	J3KQ70	363 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	TBC1D4	O60343	1298 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	MYB	P10242	640 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	KCNA3	P22001	575 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	KRT17	Q04695	432 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	SWSAP1	Q6NVH7	229 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	PARS2	Q7L3T8	475 aa	Known RBP	7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	LRRC71	Q8N4P6	559 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	JDP2	Q8WYK2	163 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	INO80B	Q9C086	356 aa	Predicted RBP	7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	ZNF518B	Q9C0D4	1074 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	GABRQ	Q9UN88	632 aa		7.38	□□□□□ -1.23
TARDBP-210	ENST00000496840	ERBB2	P04626	1255 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	SLC7A1	P30825	629 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	SRSF4	Q08170	494 aa	Known RBP	7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	LLGL1	Q15334	1064 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	CNN3	Q15417	329 aa	Known RBP	7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	SLC44A4	Q53GD3	710 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	MTHFD1L	Q6UB35	978 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	COL23A1	Q86Y22	540 aa	Predicted RBP	7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	FANCB	Q8NB91	859 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	OSCP1	Q8WVF1	389 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	ZSCAN32	Q9NX65	697 aa		7.37	□□□□□ -1.23
TARDBP-210	ENST00000496840	ISM1	B1AKI9	464 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	TBX3	O15119	743 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	PDE1A	P54750	535 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	TPTE	P56180	551 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	PROSER3	Q2NL68	480 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	PLA1A	Q53H76	456 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	PCID2	Q5JVF3	399 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840		Q6ZWC4	215 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	ABRA	Q8N0Z2	381 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	MAML1	Q92585	1016 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	R3HDM4	Q96D70	268 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	FAM204A	Q9H8W3	233 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	A1CF	Q9NQ94	594 aa	Known RBP	7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	XPNPEP3	Q9NQH7	507 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	TRMT13	Q9NUP7	481 aa	Known RBP	7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	TCEAL9	Q9UHQ7	104 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	ADAMTS5	Q9UNA0	930 aa		7.36	□□□□□ -1.23
TARDBP-210	ENST00000496840	LATS1	O95835	1130 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	CELA2A	P08217	269 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	DLD	P09622	509 aa	Known RBP	7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	NPS	P0C0P6	89 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	ENG	P17813	658 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	MLC1	Q15049	377 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	DEPDC1	Q5TB30	811 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	APOA5	Q6Q788	366 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	BPIFB1	Q8TDL5	484 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	SEMA4C	Q9C0C4	833 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	SH3BP4	Q9P0V3	963 aa		7.35	□□□□□ -1.23
TARDBP-210	ENST00000496840	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.34	□□□□□ -1.23
TARDBP-210	ENST00000496840	MBD3L3	A6NE82	208 aa	Predicted RBP	7.34	□□□□□ -1.23
TARDBP-210	ENST00000496840	TSPAN6	O43657	245 aa		7.34	□□□□□ -1.23
TARDBP-210	ENST00000496840	PRKCB	P05771	671 aa		7.34	□□□□□ -1.23
TARDBP-210	ENST00000496840	ADORA2A	P29274	412 aa		7.34	□□□□□ -1.23

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