RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 OTOL1A6NHN0 477 aaPredicted RBP16.11■□□□□ 0.17
NEK4-206ENST00000496822 KINO60870 393 aaKnown RBP16.11■□□□□ 0.17
NEK4-206ENST00000496822 VNN1O95497 513 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 STAU1O95793 577 aaKnown RBP16.11■□□□□ 0.17
NEK4-206ENST00000496822 NR3C1P04150 777 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 RPN1P04843 607 aaKnown RBP16.11■□□□□ 0.17
NEK4-206ENST00000496822 CACNA2D1P54289 1103 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 USP46P62068 366 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 DLG4P78352 724 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 PSMD2Q13200 908 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 BIRC3Q13489 604 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 TRPC3Q13507 836 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 PON2Q15165 354 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 RALGPS2Q86X27 583 aaPredicted RBP16.11■□□□□ 0.17
NEK4-206ENST00000496822 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 FSIP1Q8NA03 581 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 SUMF1Q8NBK3 374 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 ZBTB44Q8NCP5 570 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 MYCBPAPQ8TBZ2 947 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 PARD3BQ8TEW8 1205 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 CHFRQ96EP1 664 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 CYP2S1Q96SQ9 504 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 FAM83CQ9BQN1 747 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 GDPD2Q9HCC8 539 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 TMEM30AQ9NV96 361 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 ZMYM5Q9UJ78 669 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
NEK4-206ENST00000496822 PTPRZ1P23471 2315 aaPredicted RBP16.11■□□□□ 0.17
NEK4-206ENST00000496822 C2orf78A6NCI8 922 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 PHACTR2O75167 634 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 C4BPAP04003 597 aaKnown RBP16.1■□□□□ 0.17
NEK4-206ENST00000496822 ARSAP15289 507 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 GNL1P36915 607 aaPredicted RBP16.1■□□□□ 0.17
NEK4-206ENST00000496822 GRIK1P39086 918 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 CLDN10P78369 228 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 SATB1Q01826 763 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 MAPRE1Q15691 268 aaKnown RBP16.1■□□□□ 0.17
NEK4-206ENST00000496822 ITPRIPL2Q3MIP1 535 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 VSTM1Q6UX27 236 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 SPATA17Q96L03 361 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 KIF9Q9HAQ2 790 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 C2orf42Q9NWW7 574 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 THG1LQ9NWX6 298 aaKnown RBP16.1■□□□□ 0.17
NEK4-206ENST00000496822 ZSCAN32Q9NX65 697 aa16.1■□□□□ 0.17
NEK4-206ENST00000496822 PTPRDP23468 1912 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 GPR179Q6PRD1 2367 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 SOBPA7XYQ1 873 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 F8VP50 259 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 CLDN5O00501 218 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 PDXKO00764 312 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 LILRB5O75023 590 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 MYL1P05976 194 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 PTPN1P18031 435 aaKnown RBP16.09■□□□□ 0.17
NEK4-206ENST00000496822 HOXC13P31276 330 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 ATICP31939 592 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 CDH8P55286 799 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 DPYDQ12882 1025 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 USP4Q13107 963 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 NCOA4Q13772 614 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 LRRC32Q14392 662 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 ZNF268Q14587 947 aaPredicted RBP16.09■□□□□ 0.17
NEK4-206ENST00000496822 ZNF77Q15935 545 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 ZNF699Q32M78 642 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 NAIF1Q69YI7 327 aaPredicted RBP16.09■□□□□ 0.17
NEK4-206ENST00000496822 C1orf228Q6PIY5 440 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 DCLK2Q8N568 766 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 ARL14EPQ8N8R7 260 aaPredicted RBP16.09■□□□□ 0.17
NEK4-206ENST00000496822 TTC16Q8NEE8 873 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 TMEM174Q8WUU8 243 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 ATRIPQ8WXE1 791 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
NEK4-206ENST00000496822 IER2Q9BTL4 223 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 SDCBP2Q9H190 292 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 VRTNQ9H8Y1 702 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 GCNT4Q9P109 453 aa16.09■□□□□ 0.17
NEK4-206ENST00000496822 TRAV19A0A0A6YYK7 116 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 A0A1W2PQ27 194 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 A0A1W2PQ64 194 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 A0A1W2PQD8 194 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 A8MXQ7 604 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 RHOBTB3O94955 611 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 CLSTN1O94985 981 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 CKMP06732 381 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 CCR3P51677 355 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 DMWDQ09019 674 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 RUNX3Q13761 415 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 CCINQ13939 588 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 MTF1Q14872 753 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 C1orf220Q5T0J3 134 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 CEP135Q66GS9 1140 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 DENND5BQ6ZUT9 1274 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms