RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 COMTP21964 271 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 YWHAHQ04917 246 aaPredicted RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 FAM43BQ6ZT52 329 aaPredicted RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 PAQR9Q6ZVX9 377 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 C16orf59Q7L2K0 433 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 XYLT1Q86Y38 959 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 ANKRD52Q8NB46 1076 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 BCL7CQ8WUZ0 217 aaPredicted RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 OSBPL9Q96SU4 736 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 GPR62Q9BZJ7 368 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 MRPL47Q9HD33 250 aaKnown RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 CDC23Q9UJX2 597 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 COL4A6Q14031 1691 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 TCRBV5S1A1TA0A578 114 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 BEST1O76090 585 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 GALTP07902 379 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 OR4Q2P0C623 313 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 PCSK1P29120 753 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 BCAT1P54687 386 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 BST2Q10589 180 aaKnown RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 RPS6KA1Q15418 735 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 C11orf63Q6NUN7 778 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 MSANTD4Q8NCY6 345 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 SLC35F5Q8WV83 523 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 PIWIL1Q96J94 861 aaKnown RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 HNRNPABQ99729 332 aaKnown RBP17.82■□□□□ 0.44
LMNA-216ENST00000496738 COLEC11Q9BWP8 271 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 ABCB6Q9NP58 842 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 IL23AQ9NPF7 189 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 KRT82Q9NSB4 513 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 TMLHEQ9NVH6 421 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 SMARCAL1Q9NZC9 954 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 EHD2Q9NZN4 543 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 AMFRQ9UKV5 643 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 STRIP2Q9ULQ0 834 aa17.82■□□□□ 0.44
LMNA-216ENST00000496738 SPOUT1Q5T280 376 aaKnown RBP17.81■□□□□ 0.44
LMNA-216ENST00000496738 FAM171A1Q5VUB5 890 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 DCUN1D2Q6PH85 259 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 FAM183BPQ6ZVS7 135 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 FEZF2Q8TBJ5 459 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 MYLPFQ96A32 169 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 SELENOOQ9BVL4 669 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 METTL5Q9NRN9 209 aaKnown RBP17.81■□□□□ 0.44
LMNA-216ENST00000496738 GABBR2O75899 941 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 INTS6LQ5JSJ4 861 aaKnown RBP17.81■□□□□ 0.44
LMNA-216ENST00000496738 OR6B2Q6IFH4 312 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 FAM35AQ86V20 835 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 LRRTM3Q86VH5 581 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 THEM5Q8N1Q8 247 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 C3orf20Q8ND61 904 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 JOSD2Q8TAC2 188 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 ACBD6Q9BR61 282 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 MIS12Q9H081 205 aa17.81■□□□□ 0.44
LMNA-216ENST00000496738 MYO1FO00160 1098 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 TRAPPC3O43617 180 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 SPOPO43791 374 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 LCP1P13796 627 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 TYMPP19971 482 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 CACNA2D1P54289 1103 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 EPHB4P54760 987 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 MAP3K7CLP57077 242 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 FAM102AQ5T9C2 384 aaPredicted RBP17.8■□□□□ 0.44
LMNA-216ENST00000496738 SCUBE3Q8IX30 993 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 EMC1Q8N766 993 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 MYCBPAPQ8TBZ2 947 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 CWH43Q9H720 699 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 USTQ9Y2C2 406 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 KCNK3O14649 394 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 GRAP2O75791 330 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 PAX3P23760 479 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 MARCKSL1P49006 195 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 RNASE9P60153 205 aaKnown RBP17.8■□□□□ 0.44
LMNA-216ENST00000496738 OGDHQ02218 1023 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 FPGSQ05932 587 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 FUT10Q6P4F1 479 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 CLEC4CQ8WTT0 213 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 MS4A14Q96JA4 679 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 TMEM175Q9BSA9 504 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
LMNA-216ENST00000496738 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.8■□□□□ 0.445e-9■■□□□ 12.4
LMNA-216ENST00000496738 V9GYY5 206 aaPredicted RBP17.8■□□□□ 0.44
LMNA-216ENST00000496738 ARHGEF37A1IGU5 675 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 AP1G2O75843 785 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 SLU7O95391 586 aaKnown RBP17.79■□□□□ 0.44
LMNA-216ENST00000496738 SETSIPP0DME0 302 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 KRT3P12035 628 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 GABRB2P47870 512 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
LMNA-216ENST00000496738 PPP1R15BQ5SWA1 713 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 CLEC20AQ6ZU45 233 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 KRT35Q92764 455 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 KCNK16Q96T55 309 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 SLC4A5Q9BY07 1137 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 DUSP16Q9BY84 665 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 ZMYND8Q9ULU4 1186 aaPredicted RBP17.79■□□□□ 0.44
LMNA-216ENST00000496738 SF3B1O75533 1304 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■■■■ 97.6
LMNA-216ENST00000496738 TMEM191CA6NGB0 347 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms