RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
HDLBP-246ENST00000496569 PTPN1P18031 435 aaKnown RBP13.03□□□□□ -0.32
HDLBP-246ENST00000496569 RPL10AP62906 217 aaKnown RBP13.03□□□□□ -0.32
HDLBP-246ENST00000496569 PRKCQQ04759 706 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 YAF2Q8IY57 180 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 B3GALNT2Q8NCR0 500 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 MYCBPAPQ8TBZ2 947 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 PRRX2Q99811 253 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 APOBEC3GQ9HC16 384 aaKnown RBP13.03□□□□□ -0.32
HDLBP-246ENST00000496569 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.32
HDLBP-246ENST00000496569 C2orf78A6NCI8 922 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 DPYSL4O14531 572 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 CCDC130P13994 396 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
HDLBP-246ENST00000496569 ATICP31939 592 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 GRIK1P39086 918 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 MAGEA11P43364 429 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 ADAM9Q13443 819 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 WDR44Q5JSH3 913 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 TRIM68Q6AZZ1 485 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 TXNDC11Q6PKC3 985 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 C4orf50Q6ZRC1 276 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 ACOT1Q86TX2 421 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 CMTM8Q8IZV2 173 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
HDLBP-246ENST00000496569 DNASE1L2Q92874 299 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-246ENST00000496569 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 FUBP3Q96I24 572 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDLBP-246ENST00000496569 SHDQ96IW2 340 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 TWNKQ96RR1 684 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 CYP2S1Q96SQ9 504 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 GPR88Q9GZN0 384 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 FAM49BQ9NUQ9 324 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 GTSE1Q9NYZ3 720 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 R4GN57 208 aa13.02□□□□□ -0.33
HDLBP-246ENST00000496569 BIN1O00499 593 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 SCAMP3O14828 347 aaKnown RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 KIF20AO95235 890 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 FGF19O95750 216 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 ASS1P00966 412 aaKnown RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 CCNE1P24864 410 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 ASPAP45381 313 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 NDST1P52848 882 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 FCHO2Q0JRZ9 810 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 FZD5Q13467 585 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 NFIL3Q16649 462 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 ARL14EPQ8N8R7 260 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 BPIFB1Q8TDL5 484 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 TMEM174Q8WUU8 243 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 SEMA4DQ92854 862 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 IRF7Q92985 503 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 MED10Q9BTT4 135 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
HDLBP-246ENST00000496569 RBM12Q9NTZ6 932 aaKnown RBP13.01□□□□□ -0.33
HDLBP-246ENST00000496569 CFAP54Q96N23 3096 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 EP300Q09472 2414 aaPredicted RBP13□□□□□ -0.33
HDLBP-246ENST00000496569 GPR179Q6PRD1 2367 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 CHADO15335 359 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 KRT13P13646 458 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 ARSAP15289 507 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 CD58P19256 250 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 ANXA13P27216 316 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 HOXC13P31276 330 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 AVPR1AP37288 418 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 AP3M2P53677 418 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 NOP14P78316 857 aaKnown RBP13□□□□□ -0.33
HDLBP-246ENST00000496569 ANKRD40Q6AI12 368 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 KLHL10Q6JEL2 608 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 TSSK4Q6SA08 328 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 ZNF852Q6ZMS4 543 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 INTS8Q75QN2 995 aaKnown RBP13□□□□□ -0.33
HDLBP-246ENST00000496569 ASCL5Q7RTU5 278 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 MAML2Q8IZL2 1156 aaPredicted RBP13□□□□□ -0.33
HDLBP-246ENST00000496569 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 C12orf29Q8N999 325 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 SPATA20Q8TB22 786 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 CSGALNACT1Q8TDX6 532 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 FAM3CQ92520 227 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 JAKMIP2Q96AA8 810 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 TRMT2BQ96GJ1 504 aaKnown RBP13□□□□□ -0.33
HDLBP-246ENST00000496569 MYRFLQ96LU7 910 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 KCNK16Q96T55 309 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 BCO2Q9BYV7 579 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 HPS4Q9NQG7 708 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 GKN1Q9NS71 199 aa13□□□□□ -0.33
HDLBP-246ENST00000496569 SPATA6Q9NWH7 488 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms