RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ACADSBP45954 432 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 RAP1GAPP47736 663 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 MARCKSL1P49006 195 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 RAD23BP54727 409 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 KRT17Q04695 432 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SNX17Q15036 470 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 CNGA2Q16280 664 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TFDP3Q5H9I0 405 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 MARCH8Q5T0T0 291 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TMEM63BQ5T3F8 832 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 FAM102AQ5T9C2 384 aaPredicted RBP7.29□□□□□ -1.24
USP39-219ENST00000496047 DUPD1Q68J44 220 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TWF2Q6IBS0 349 aaKnown RBP7.29□□□□□ -1.24
USP39-219ENST00000496047 SAPCD2Q86UD0 394 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SESTD1Q86VW0 696 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ATL2Q8NHH9 583 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 DNAJB3Q8WWF6 145 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SEC14L1Q92503 715 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ELMO3Q96BJ8 720 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SNF8Q96H20 258 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 HHIPL1Q96JK4 782 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TNIP3Q96KP6 325 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ZIM3Q96PE6 472 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SPSB2Q99619 263 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 CELF4Q9BZC1 486 aaKnown RBP7.29□□□□□ -1.24
USP39-219ENST00000496047 OSBPL8Q9BZF1 889 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TRIM31Q9BZY9 425 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ADAMTS10Q9H324 1103 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 PLEKHA4Q9H4M7 779 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ST7Q9NRC1 585 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 METTL5Q9NRN9 209 aaKnown RBP7.29□□□□□ -1.24
USP39-219ENST00000496047 SNTG2Q9NY99 539 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 WHRNQ9P202 907 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 CNTN3Q9P232 1028 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SIX4Q9UIU6 781 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ADAM21Q9UKJ8 722 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 PLAAQ9Y263 795 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TLL2Q9Y6L7 1015 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 MIA3Q5JRA6 1907 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 THSD7BQ9C0I4 1608 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 LRRD1A4D1F6 860 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TMEM191CA6NGB0 347 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ZSCAN5CA6NGD5 496 aaPredicted RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 CA12O43570 354 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 HUS1O60921 280 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 GPR32O75388 356 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ZNF189O75820 626 aaPredicted RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 RECQL4O94761 1208 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ERBB2P04626 1255 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 IQCF3P0C7M6 154 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 RALAP11233 206 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 SKIP12755 728 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 CAPN2P17655 700 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ITIH2P19823 946 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 GPD1P21695 349 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PAX3P23760 479 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 HOXD10P28358 340 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ACTN2P35609 894 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 RAB27AP51159 221 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 NDST1P52848 882 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PMS2P54278 862 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 BCAT1P54687 386 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 MRPS25P82663 173 aaKnown RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 MRPS6P82932 125 aaKnown RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 PURAQ00577 322 aaKnown RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 DHX9Q08211 1270 aaKnown RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 ADCY2Q08462 1091 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TMEM62Q0P6H9 643 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PDCLQ13371 301 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PTK6Q13882 451 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 CCNG2Q16589 344 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 GOLGA7BQ2TAP0 167 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 DEFB115Q30KQ5 88 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PTPN20Q4JDL3 420 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 MSS51Q4VC12 460 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 FBXO47Q5MNV8 452 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 CEP85LQ5SZL2 805 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 AGBL2Q5U5Z8 902 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 CST9Q5W186 159 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 OR6B2Q6IFH4 312 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 DENND1BQ6P3S1 775 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 LCLAT1Q6UWP7 414 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 LYPD8Q6UX82 237 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 DPH6Q7L8W6 267 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TMC3Q7Z5M5 1100 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PCGF5Q86SE9 256 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 MAP7D3Q8IWC1 876 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TMEM192Q8IY95 271 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PRELID2Q8N945 189 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 PCSK9Q8NBP7 692 aaKnown RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 SLC4A11Q8NBS3 891 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 APPL2Q8NEU8 664 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 OR6B3Q8NGW1 331 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.28□□□□□ -1.24
USP39-219ENST00000496047 USP6NLQ92738 828 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 ZBTB10Q96DT7 871 aa7.28□□□□□ -1.24
USP39-219ENST00000496047 FAM84AQ96KN4 292 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms