RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PSMC1P62191 440 aaKnown RBP25.86■■□□□ 1.73
HLA-C-209ENST00000495835 NCOA4Q13772 614 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 SGSM1Q2NKQ1 1148 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 ZNF667Q5HYK9 610 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 RALGPS2Q86X27 583 aaPredicted RBP25.86■■□□□ 1.73
HLA-C-209ENST00000495835 SCN4BQ8IWT1 228 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 MAB21L3Q8N8X9 362 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 PCED1BQ96HM7 432 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 TDP1Q9NUW8 608 aa25.86■■□□□ 1.73
HLA-C-209ENST00000495835 SPATA6Q9NWH7 488 aaPredicted RBP25.86■■□□□ 1.73
HLA-C-209ENST00000495835 FANCMQ8IYD8 2048 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 GOLGA6L4A6NEF3 574 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 PRR23AA6NEV1 266 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 P4HA1P13674 534 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 PFKLP17858 780 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 PTPN1P18031 435 aaKnown RBP25.85■■□□□ 1.73
HLA-C-209ENST00000495835 BDNFP23560 247 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 CYP27A1Q02318 531 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 ZNF699Q32M78 642 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 ZACNQ401N2 412 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 SDHAF4Q5VUM1 108 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 C8orf48Q96LL4 319 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 GDPD2Q9HCC8 539 aa25.85■■□□□ 1.73
HLA-C-209ENST00000495835 NXF1Q9UBU9 619 aaKnown RBP25.85■■□□□ 1.73
HLA-C-209ENST00000495835 KIF26AQ9ULI4 1882 aaPredicted RBP25.85■■□□□ 1.73
HLA-C-209ENST00000495835 A8MXQ7 604 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 ANXA13P27216 316 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 GRIK1P39086 918 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 PPP3CCP48454 512 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 PDE6CP51160 858 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 KPNA1P52294 538 aaPredicted RBP25.84■■□□□ 1.73
HLA-C-209ENST00000495835 MCCD1P59942 119 aaPredicted RBP25.84■■□□□ 1.73
HLA-C-209ENST00000495835 CCDC142Q17RM4 750 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 CEP135Q66GS9 1140 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 DENND5BQ6ZUT9 1274 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 INTS8Q75QN2 995 aaKnown RBP25.84■■□□□ 1.73
HLA-C-209ENST00000495835 MAML2Q8IZL2 1156 aaPredicted RBP25.84■■□□□ 1.73
HLA-C-209ENST00000495835 FMR1NBQ8N0W7 255 aaPredicted RBP25.84■■□□□ 1.73
HLA-C-209ENST00000495835 ELOVL4Q9GZR5 314 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 RMND1Q9NWS8 449 aa25.84■■□□□ 1.73
HLA-C-209ENST00000495835 NR2F2P24468 414 aa25.83■■□□□ 1.73
HLA-C-209ENST00000495835 NOP14P78316 857 aaKnown RBP25.83■■□□□ 1.73
HLA-C-209ENST00000495835 MDH1BQ5I0G3 518 aa25.83■■□□□ 1.73
HLA-C-209ENST00000495835 TXNDC8Q6A555 127 aa25.83■■□□□ 1.73
HLA-C-209ENST00000495835 USP13Q92995 863 aaPredicted RBP25.83■■□□□ 1.73
HLA-C-209ENST00000495835 TNIP3Q96KP6 325 aa25.83■■□□□ 1.73
HLA-C-209ENST00000495835 TTLL2Q9BWV7 592 aa25.83■■□□□ 1.73
HLA-C-209ENST00000495835 GTPBP4Q9BZE4 634 aaKnown RBP25.83■■□□□ 1.73
HLA-C-209ENST00000495835 CHRDQ9H2X0 955 aa25.83■■□□□ 1.73
HLA-C-209ENST00000495835 NDRG2Q9UN36 371 aaKnown RBP25.83■■□□□ 1.73
HLA-C-209ENST00000495835 ANAPC1Q9H1A4 1944 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 TADA3O75528 432 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 VNN1O95497 513 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 USP17L7P0C7H9 530 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 CCNE1P24864 410 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 PSMC2P35998 433 aaKnown RBP25.82■■□□□ 1.72
HLA-C-209ENST00000495835 DLG4P78352 724 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 EDRF1Q3B7T1 1238 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 SV2AQ7L0J3 742 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 ASCL5Q7RTU5 278 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 GPIHBP1Q8IV16 184 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 B3GALNT2Q8NCR0 500 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 FAM83CQ9BQN1 747 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 NME7Q9Y5B8 376 aa25.82■■□□□ 1.72
HLA-C-209ENST00000495835 SPECC1L-ADORA2AF8WAN1 911 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 VAMP7P51809 220 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 FAM160A1Q05DH4 1040 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 ADAM9Q13443 819 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 LRRC32Q14392 662 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 ITPRIPL2Q3MIP1 535 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 COBLL1Q53SF7 1204 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 TIGD1Q96MW7 591 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 GSDMAQ96QA5 445 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 FAM126AQ9BYI3 521 aaPredicted RBP25.81■■□□□ 1.72
HLA-C-209ENST00000495835 LMAN1LQ9HAT1 526 aa25.81■■□□□ 1.72
HLA-C-209ENST00000495835 TRAV19A0A0A6YYK7 116 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 CHRNB1P11230 501 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 KRT13P13646 458 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 TCF3P15923 654 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 CTHP32929 405 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 PPP2R5DQ14738 602 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 ZCWPW2Q504Y3 356 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 DGKKQ5KSL6 1271 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 STKLD1Q8NE28 680 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 ENGASEQ8NFI3 743 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 GKN1Q9NS71 199 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 GTSE1Q9NYZ3 720 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 TRPM5Q9NZQ8 1165 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 HOOK1Q9UJC3 728 aaKnown RBP25.8■■□□□ 1.72
HLA-C-209ENST00000495835 MAPK8IP1Q9UQF2 711 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 ATP8B3O60423 1300 aa25.8■■□□□ 1.72
HLA-C-209ENST00000495835 AKAP3O75969 853 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 ASS1P00966 412 aaKnown RBP25.79■■□□□ 1.72
HLA-C-209ENST00000495835 AMPD2Q01433 879 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 C1orf220Q5T0J3 134 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 CC2D1AQ6P1N0 951 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-209ENST00000495835 UNC93AQ86WB7 457 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 FAM186BQ8IYM0 893 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 SYNPOQ8N3V7 929 aa25.79■■□□□ 1.72
HLA-C-209ENST00000495835 NELL1Q92832 810 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms