RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 MMRN2Q9H8L6 949 aa10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FANCLQ9NW38 375 aa10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SPG21Q9NZD8 308 aa10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CACNG4Q9UBN1 327 aa10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 MTUS1Q9ULD2 1270 aa10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.88□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ANO9A1A5B4 782 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TMEM189-UBE2V1I3L0A0 370 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PHACTR2O75167 634 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TADA2AO75478 443 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.672e-9■■□□□ 12.2
RAB11FIP3-211ENST00000495663 B3GAT3O94766 335 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KIF4AO95239 1232 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 WISP1O95388 367 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C4BPAP04003 597 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KRT19P08727 400 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PAX3P23760 479 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 EEF1GP26641 437 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 GTF2H1P32780 548 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PNPLA4P41247 253 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 MXI1P50539 228 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TPM4P67936 248 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 RBP5P82980 135 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KRT17Q04695 432 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TRPC3Q13507 836 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KCNJ12Q14500 433 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 NCAPHQ15003 741 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 IQCB1Q15051 598 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ZACNQ401N2 412 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 HSP90AA4PQ58FG1 418 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TCP11X2Q5H9J9 407 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C1orf220Q5T0J3 134 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CDKAL1Q5VV42 579 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C9orf57Q5W0N0 161 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 DHX40Q8IX18 779 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TMEM130Q8N3G9 435 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ANKRD20A12PQ8NF67 263 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 RABGGTAQ92696 567 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CCDC97Q96F63 343 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ZNF560Q96MR9 790 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C11orf84Q9BUA3 381 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CBX8Q9HC52 389 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TMEM8AQ9HCN3 771 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 MARCH5Q9NX47 278 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ABI2Q9NYB9 513 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ADAM28Q9UKQ2 775 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 AGAP1Q9UPQ3 857 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 NUB1Q9Y5A7 615 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TRIOBPQ9H2D6 2365 aa10.87□□□□□ -0.67
RAB11FIP3-211ENST00000495663 GOLGA6L19H0YKK7 550 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SOX1O00570 391 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PIRO00625 290 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TRAPPC3O43617 180 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 N4BP1O75113 896 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FGF18O76093 207 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 AFPP02771 609 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TPM2P07951 284 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CDK11BP21127 795 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 GCLMP48507 274 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TAF6P49848 677 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PLCB3Q01970 1234 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PPP3CAQ08209 521 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 MAN2A1Q16706 1144 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SV2CQ496J9 727 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 HABP4Q5JVS0 413 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TDRD10Q5VZ19 366 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KRT39Q6A163 491 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C15orf39Q6ZRI6 1047 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SPRED2Q7Z698 418 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 LRRC52Q8N7C0 313 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KLHL23Q8NBE8 558 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 C3orf58Q8NDZ4 430 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 HASPINQ8TF76 798 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ARNTL2Q8WYA1 636 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ZNF576Q9H609 170 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CERS4Q9HA82 394 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 STK39Q9UEW8 545 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SIX4Q9UIU6 781 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CHD7Q9P2D1 2997 aa10.86□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SF3B1O75533 1304 aaKnown RBP eCLIP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 F8W810 466 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 H3BNC9 293 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PPEF2O14830 753 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CLSTN1O94985 981 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CST3P01034 146 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ITGB1P05556 798 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ZNF18P17022 549 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FSTP19883 344 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PIK3CAP42336 1068 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FMO5P49326 533 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms