RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 RASAL3Q86YV0 1011 aa6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 SMCR8Q8TEV9 937 aaPredicted RBP6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 OSCP1Q8WVF1 389 aa6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 SACM1LQ9NTJ5 587 aa6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 ARPP21Q9UBL0 812 aaPredicted RBP6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 DKK3Q9UBP4 350 aa6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 AFF4Q9UHB7 1163 aaKnown RBP6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 PADI4Q9UM07 663 aa6.48□□□□□ -1.37
NCKAP1-208ENST00000495619 MYO1FO00160 1098 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 ZBED1O96006 694 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 ZKSCAN1P17029 563 aaPredicted RBP6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 FBLP22087 321 aaKnown RBP6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 DGKEP52429 567 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 SUMO3P55854 103 aaPredicted RBP6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 NHLH1Q02575 133 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 MYO1EQ12965 1108 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 POLD3Q15054 466 aaPredicted RBP6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 PLA1AQ53H76 456 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 AARS2Q5JTZ9 985 aaKnown RBP6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 CEP85Q6P2H3 762 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 PTF1AQ7RTS3 328 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 SLC29A4Q7RTT9 530 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 SPARTQ8N0X7 666 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 LRRC71Q8N4P6 559 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 FAM98AQ8NCA5 519 aaKnown RBP6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 ATG4AQ8WYN0 398 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 TBC1D5Q92609 795 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 PPP1R9BQ96SB3 815 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 C22orf23Q9BZE7 217 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 ATP6V0A4Q9HBG4 840 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 ZNF287Q9HBT7 754 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 SERHLQ9NQF3 203 aa6.47□□□□□ -1.37
NCKAP1-208ENST00000495619 A1L4Q6 167 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 TBX3O15119 743 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 PDHA1P08559 390 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 PRKAR1BP31321 381 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 CYP2C18P33260 490 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 TPTEP56180 551 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 GBX1Q14549 363 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 CNGA2Q16280 664 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 APOA5Q6Q788 366 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 MTHFD1LQ6UB35 978 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 PARS2Q7L3T8 475 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 CHST15Q7LFX5 561 aaPredicted RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 FANCBQ8NB91 859 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 RP9Q8TA86 221 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 TTC8Q8TAM2 541 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 IPCEF1Q8WWN9 437 aaPredicted RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 RAPGEF4Q8WZA2 1011 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 TSR2Q969E8 191 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 SPSB4Q96A44 273 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 TTC17Q96AE7 1141 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 DPCDQ9BVM2 203 aaPredicted RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 PRDM13Q9H4Q3 707 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 ADARB2Q9NS39 739 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 OBP2AQ9NY56 170 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 SSX2IPQ9Y2D8 614 aa6.46□□□□□ -1.38
NCKAP1-208ENST00000495619 COL11A2P13942 1736 aaPredicted RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 MBD3L4A6NDZ8 208 aaPredicted RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 MBD3L3A6NE82 208 aaPredicted RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 hCG_1984214I3L0E3 225 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 PSMD9O00233 223 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 TPP1O14773 563 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 RASSF9O75901 435 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 MAP4K4O95819 1239 aaPredicted RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 PRKCBP05771 671 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 HNRNPCP07910 306 aaKnown RBP eCLIP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 IL6RP08887 468 aaPredicted RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 DRD4P21917 467 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 LIPAP38571 399 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 EEFSECP57772 596 aaKnown RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 CCDC142Q17RM4 750 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 DEPDC1Q5TB30 811 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 MAVSQ7Z434 540 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 C14orf80Q86SX3 495 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 RAB11FIP4Q86YS3 637 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 FAM156AQ8NDB6 213 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 BPIFB1Q8TDL5 484 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 XAGE5Q8WWM1 108 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 GLG1Q92896 1179 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 PPP2R3CQ969Q6 453 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 NMD3Q96D46 503 aaKnown RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 APIPQ96GX9 242 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 XPNPEP3Q9NQH7 507 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 KLHL42Q9P2K6 505 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 CPNE7Q9UBL6 633 aa6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 MRPS17Q9Y2R5 130 aaKnown RBP6.45□□□□□ -1.38
NCKAP1-208ENST00000495619 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 TRIM43BA6NCK2 446 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 JTBO76095 146 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 INMTO95050 263 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 FESP07332 822 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 NPSP0C0P6 89 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 ELFN1P0C7U0 828 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 MYF5P13349 255 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 KLRC1P26715 233 aa6.44□□□□□ -1.38
NCKAP1-208ENST00000495619 ATXN1P54253 815 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms