RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 SLC18A3Q16572 532 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 PUS10Q3MIT2 529 aaKnown RBP10.05□□□□□ -0.8
ACTN4-207ENST00000495553 LEXMQ3ZCV2 418 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 MDH1BQ5I0G3 518 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 INTS6LQ5JSJ4 861 aaKnown RBP10.05□□□□□ -0.8
ACTN4-207ENST00000495553 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 ARHGAP17Q68EM7 881 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 WDR59Q6PJI9 974 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 SPATA31D4Q6ZUB0 917 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 NOP9Q86U38 636 aaKnown RBP10.05□□□□□ -0.8
ACTN4-207ENST00000495553 SPATA2LQ8IUW3 424 aaPredicted RBP10.05□□□□□ -0.8
ACTN4-207ENST00000495553 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 ZNF606Q8WXB4 792 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 CYFIP2Q96F07 1278 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 ASB2Q96Q27 587 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 ELOVL4Q9GZR5 314 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 PLEKHA4Q9H4M7 779 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 MAN1C1Q9NR34 630 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 CLEC1BQ9P126 229 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 ADAMTS1Q9UHI8 967 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
ACTN4-207ENST00000495553 EPN1Q9Y6I3 576 aaPredicted RBP10.05□□□□□ -0.8
ACTN4-207ENST00000495553 EIF3CLB5ME19 914 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 M0QYV0 167 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ADAM12O43184 909 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ZSCAN12O43309 604 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 NDUFA10O95299 355 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 MMEP08473 750 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 CCDC175P0C221 793 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 FAM200BP0CF97 657 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 SETSIPP0DME0 302 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ACAT1P24752 427 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 BRD2P25440 801 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 LMO2P25791 158 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 BCAT1P54687 386 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 PSMC1P62191 440 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ORC1Q13415 861 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 SMAD4Q13485 552 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 KCNC3Q14003 757 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 RAB33AQ14088 237 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 GOLGA7BQ2TAP0 167 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 SLC39A12Q504Y0 691 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 LIN9Q5TKA1 542 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 HGSNATQ68CP4 663 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 SLC8B1Q6J4K2 584 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 CES5AQ6NT32 575 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 LCLAT1Q6UWP7 414 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 RSPO2Q6UXX9 243 aaPredicted RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ZNF571Q7Z3V5 609 aaPredicted RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 KIAA1328Q86T90 577 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 KREMEN2Q8NCW0 462 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 IPO4Q8TEX9 1081 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 HDAC7Q8WUI4 952 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 SMARCD1Q96GM5 515 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 FUBP3Q96I24 572 aaKnown RBP eCLIP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 MSLNLQ96KJ4 702 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 EIF3CQ99613 913 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 APOL5Q9BWW9 433 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 LHX5Q9H2C1 402 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 DPEP3Q9H4B8 488 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 SFXN1Q9H9B4 322 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 FAM49BQ9NUQ9 324 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 ARHGAP20Q9P2F6 1191 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 HMGXB4Q9UGU5 601 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 NOCTQ9UK39 431 aaKnown RBP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 MAFFQ9ULX9 164 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.04□□□□□ -0.8
ACTN4-207ENST00000495553 PCDHB5Q9Y5E4 795 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 KIAA1671Q9BY89 1806 aa10.04□□□□□ -0.8
ACTN4-207ENST00000495553 VCANP13611 3396 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 SOWAHDA6NJG2 315 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 O00370 1275 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 PRRG1O14668 218 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 TBC1D4O60343 1298 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 MYBL1P10243 752 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 GZMAP12544 262 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 DESP17661 470 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 ADORA2BP29275 332 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 ACADSBP45954 432 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 KCNQ1P51787 676 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 ROR1Q01973 937 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 ITIH3Q06033 890 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 BST2Q10589 180 aaKnown RBP10.03□□□□□ -0.8
ACTN4-207ENST00000495553 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 CCDC122Q5T0U0 273 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
ACTN4-207ENST00000495553 E4F1Q66K89 784 aaPredicted RBP10.03□□□□□ -0.8
ACTN4-207ENST00000495553 TPGS2Q68CL5 300 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 ALKBH5Q6P6C2 394 aaKnown RBP10.03□□□□□ -0.8
ACTN4-207ENST00000495553 LILRA6Q6PI73 481 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 SYCE2Q6PIF2 218 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 TMC5Q6UXY8 1006 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 OSTM1Q86WC4 334 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
ACTN4-207ENST00000495553 C12orf76Q8N812 135 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms