RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 VSTM1Q6UX27 236 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 TMC8Q8IU68 726 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 ING5Q8WYH8 240 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 MYADMQ96S97 322 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 KCNK16Q96T55 309 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 ASAH2Q9NR71 780 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 PRKAG3Q9UGI9 489 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 MAGED2Q9UNF1 606 aaPredicted RBP20.64■□□□□ 0.89
HDAC4-212ENST00000495497 SLC38A8A6NNN8 435 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 AP1G2O75843 785 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 BEST1O76090 585 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 GBP2P32456 591 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 MFAP3P55082 362 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 TAF12Q16514 161 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 PRSS36Q5K4E3 855 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 FKBP15Q5T1M5 1219 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 CYP4A22Q5TCH4 519 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 POTEHQ6S545 545 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 PDZD4Q76G19 769 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 ITIH5Q86UX2 942 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 ST13P5Q8NFI4 369 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 UHRF1Q96T88 793 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 HNRNPABQ99729 332 aaKnown RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 SMOQ99835 787 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 FAM124BQ9H5Z6 455 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 CD320Q9NPF0 282 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 KRT82Q9NSB4 513 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 DNAJC12Q9UKB3 198 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 MRPS23Q9Y3D9 190 aaKnown RBP20.63■□□□□ 0.89
HDAC4-212ENST00000495497 ASB3Q9Y575 518 aa20.63■□□□□ 0.89
HDAC4-212ENST00000495497 ATP8B3O60423 1300 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 DOCK6Q96HP0 2047 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 LGALS16A8MUM7 142 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 LOC730098B7Z3J9 87 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 MOSPD3O75425 235 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 CAVIN2O95810 425 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 KRT5P13647 590 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 CD19P15391 556 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 HMGA1P17096 107 aaKnown RBP20.62■□□□□ 0.89
HDAC4-212ENST00000495497 CEBPBP17676 345 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 TRIM21P19474 475 aaKnown RBP20.62■□□□□ 0.89
HDAC4-212ENST00000495497 UBXN1Q04323 297 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 PTPN21Q16825 1174 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 KLHDC7AQ5VTJ3 777 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 RBBP8NLQ8NC74 664 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-212ENST00000495497 ZMIZ2Q8NF64 920 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 C8orf48Q96LL4 319 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 VCANP13611 3396 aa20.62■□□□□ 0.89
HDAC4-212ENST00000495497 C19orf67A6NJJ6 358 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 TRIM66O15016 1216 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 TEX33O43247 280 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 ANXA13P27216 316 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 SSTR3P32745 418 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-212ENST00000495497 EPHA5P54756 1037 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 MAP3K7CLP57077 242 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 USP46P62068 366 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 TDRD5Q8NAT2 981 aaKnown RBP20.61■□□□□ 0.89
HDAC4-212ENST00000495497 SHKBP1Q8TBC3 707 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 TFAP2BQ92481 460 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 SMARCD1Q96GM5 515 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 DNAI2Q9GZS0 605 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 AVENQ9NQS1 362 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-212ENST00000495497 NR2E1Q9Y466 385 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 FHOD1Q9Y613 1164 aa20.61■□□□□ 0.89
HDAC4-212ENST00000495497 NOTCH4Q99466 2003 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 A0A1W2PRU2 124 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 FAM200BP0CF97 657 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 PNMA6AP0CW24 399 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-212ENST00000495497 CSH1P0DML2 217 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 CSH2P0DML3 217 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 GABRR2P28476 465 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 USP8P40818 1118 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 ZNF132P52740 706 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 SYCP1Q15431 976 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 TEAD2Q15562 447 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 SGO2Q562F6 1265 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 ARHGAP17Q68EM7 881 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 CLEC20AQ6ZU45 233 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 GAREM2Q75VX8 874 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 ENOSF1Q7L5Y1 443 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 OTOP3Q7RTS5 596 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 FGF13Q92913 245 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 JAKMIP2Q96AA8 810 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 MCRS1Q96EZ8 462 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 SPATA17Q96L03 361 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 NAP1L5Q96NT1 182 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-212ENST00000495497 ZSWIM1Q9BR11 485 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 IL21Q9HBE4 155 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 DMAP1Q9NPF5 467 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-212ENST00000495497 ACP6Q9NPH0 428 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 USTQ9Y2C2 406 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 SIK3Q9Y2K2 1263 aa20.6■□□□□ 0.89
HDAC4-212ENST00000495497 GOLGA6L19H0YKK7 550 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 ZNF197O14709 1029 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 NOL4O94818 638 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 PAEPP09466 180 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 VDRP11473 427 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 BRD2P25440 801 aaKnown RBP20.59■□□□□ 0.89
HDAC4-212ENST00000495497 TPM4P67936 248 aa20.59■□□□□ 0.89
HDAC4-212ENST00000495497 CYP4F8P98187 520 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms