RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 UROC1Q96N76 676 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 PBX4Q9BYU1 374 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 ANKZF1Q9H8Y5 726 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 FEZ2Q9UHY8 353 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 RASAL2Q9UJF2 1139 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 HES2Q9Y543 173 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 CDH23Q9H251 3354 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 SIGLEC16A6NMB1 481 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 M0QYV0 167 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 PDE2AO00408 941 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 MEFVO15553 781 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 ATMINO43313 823 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 RNF8O76064 485 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 KRT3P12035 628 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 PPM1AP35813 382 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 SSR1P43307 286 aaKnown RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 ACADSBP45954 432 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 RAP1GAPP47736 663 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 LHX1P48742 406 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 CLCN6P51797 869 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 TCTN1Q2MV58 587 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 HDXQ7Z353 690 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 METTL23Q86XA0 190 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 RBM41Q96IZ5 413 aaKnown RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 MS4A14Q96JA4 679 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 ZMAT2Q96NC0 199 aaKnown RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 TGS1Q96RS0 853 aaKnown RBP10.82□□□□□ -0.68
HDAC3-214ENST00000495485 OSBPL7Q9BZF2 842 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 RAB17Q9H0T7 212 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 RSAD1Q9HA92 442 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 KLK14Q9P0G3 267 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 STIM2Q9P246 746 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 TMEM59LQ9UK28 342 aa10.82□□□□□ -0.68
HDAC3-214ENST00000495485 BRWD1Q9NSI6 2320 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 MYO7AQ13402 2215 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 TMEM191CA6NGB0 347 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 C5orf67F2Z3F1 127 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 O00370 1275 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 RRP9O43818 475 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 MICAL2O94851 1124 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 UPP2O95045 317 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 FGGP02679 453 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 LAG3P18627 525 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 WARSP23381 471 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 TNFRSF8P28908 595 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 GBP1P32455 592 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 GABRB2P47870 512 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 COPS2P61201 443 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 ERVK-21P61565 698 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 PSMC1P62191 440 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 BTG3Q14201 252 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 GLRA4Q5JXX5 417 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 ZFYVE27Q5T4F4 411 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 LRRC38Q5VT99 294 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 PPP2R2DQ66LE6 453 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 ARHGAP17Q68EM7 881 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 CC2D1AQ6P1N0 951 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 RCOR2Q8IZ40 523 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 CRYBG2Q8N1P7 616 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 WHAMMQ8TF30 809 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 FNIP1Q8TF40 1166 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 TFAP2BQ92481 460 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 C18orf25Q96B23 403 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 PPP1R10Q96QC0 940 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 LRRC1Q9BTT6 524 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 ELOVL4Q9GZR5 314 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 SDCBP2Q9H190 292 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 GOLPH3Q9H4A6 298 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 RBM12Q9NTZ6 932 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 ASNSD1Q9NWL6 643 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 LMCD1Q9NZU5 365 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 TUBGCP4Q9UGJ1 667 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 DSEQ9UL01 958 aa10.81□□□□□ -0.68
HDAC3-214ENST00000495485 UTP11Q9Y3A2 253 aaKnown RBP10.81□□□□□ -0.68
HDAC3-214ENST00000495485 NCOR1O75376 2440 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 PODXLO00592 558 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 CYB561D2O14569 222 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 ZRANB2O95218 330 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDAC3-214ENST00000495485 CALCAP01258 141 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 KRT7P08729 469 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 CHRNA3P32297 505 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 GPD2P43304 727 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 PEX5P50542 639 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 GUCY2FP51841 1108 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 BCAT1P54687 386 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 LILRA4P59901 499 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 RNASE9P60153 205 aaKnown RBP10.8□□□□□ -0.68
HDAC3-214ENST00000495485 LMNB2Q03252 620 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 UBE3AQ05086 875 aa10.8□□□□□ -0.68
HDAC3-214ENST00000495485 BST2Q10589 180 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms