RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 IP6K2Q9UHH9 426 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.19■□□□□ 0.34
CBX4-204ENST00000495122 ATMINO43313 823 aaPredicted RBP17.19■□□□□ 0.34
CBX4-204ENST00000495122 CILPO75339 1184 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 KRT19P08727 400 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 VDRP11473 427 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 HOXA11P31270 313 aaPredicted RBP17.19■□□□□ 0.34
CBX4-204ENST00000495122 AARSP49588 968 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■■□ 23
CBX4-204ENST00000495122 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 LRRC38Q5VT99 294 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 MREGQ8N565 214 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 ALG3Q92685 438 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 HPDLQ96IR7 371 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 ERVK-5Q9HDB9 667 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 FAM114A2Q9NRY5 505 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 CNTN3Q9P232 1028 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 RASAL2Q9UJF2 1139 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 RWDD3Q9Y3V2 267 aa17.19■□□□□ 0.34
CBX4-204ENST00000495122 RAD51CO43502 376 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 PHF2O75151 1096 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 NPTXRO95502 500 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 RB1P06400 928 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 CD58P19256 250 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 CYP3A5P20815 502 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 CETN2P41208 172 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 MAMLD1Q13495 774 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 SMC1AQ14683 1233 aaKnown RBP17.18■□□□□ 0.34
CBX4-204ENST00000495122 CYP1B1Q16678 543 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 CDR2LQ86X02 465 aaPredicted RBP17.18■□□□□ 0.34
CBX4-204ENST00000495122 RHOT1Q8IXI2 618 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 CMTR2Q8IYT2 770 aaKnown RBP17.18■□□□□ 0.34
CBX4-204ENST00000495122 C12orf50Q8NA57 414 aaPredicted RBP17.18■□□□□ 0.34
CBX4-204ENST00000495122 C3orf20Q8ND61 904 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 FEZF2Q8TBJ5 459 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 TMEM40Q8WWA1 233 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 KIF12Q96FN5 646 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 C11orf70Q9BRQ4 267 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 CDHR5Q9HBB8 845 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 HOMER3Q9NSC5 361 aa17.18■□□□□ 0.34
CBX4-204ENST00000495122 BARX2Q9UMQ3 279 aaPredicted RBP17.18■□□□□ 0.34
CBX4-204ENST00000495122 UBQLN1Q9UMX0 589 aaKnown RBP17.18■□□□□ 0.34
CBX4-204ENST00000495122 TDRD15B5MCY1 1934 aaKnown RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 TMEM110-MUSTN1A8MSY1 372 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 FAM163BP0C2L3 166 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 BMPR1AP36894 532 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 PNPLA4P41247 253 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 TNNT3P45378 269 aaPredicted RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 FNTAP49354 379 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 RAD23BP54727 409 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 DRG2P55039 364 aaKnown RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 GUCY2DQ02846 1103 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 BTG3Q14201 252 aaPredicted RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 PDCD11Q14690 1871 aaKnown RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 ZBTB6Q15916 424 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 HSP90B2PQ58FF3 399 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 XKR4Q5GH76 650 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 ALS2CLQ60I27 953 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 ALKAL1Q6UXT8 129 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 MMS22LQ6ZRQ5 1243 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 KLHL7Q8IXQ5 586 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 NIPA2Q8N8Q9 360 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 FNIP1Q8TF40 1166 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 HDAC7Q8WUI4 952 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 ELMO3Q96BJ8 720 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 TMEM176AQ96HP8 235 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 C11orf84Q9BUA3 381 aaPredicted RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 TRIM6Q9C030 488 aaPredicted RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 LMAN2LQ9H0V9 348 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 NSUN3Q9H649 340 aaKnown RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 EPB41L5Q9HCM4 733 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 NXF1Q9UBU9 619 aaKnown RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 PCYOX1Q9UHG3 505 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 AGAP1Q9UPQ3 857 aa17.17■□□□□ 0.34
CBX4-204ENST00000495122 UTP11Q9Y3A2 253 aaKnown RBP17.17■□□□□ 0.34
CBX4-204ENST00000495122 PODXLO00592 558 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 FSCN2O14926 492 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 MGEA5O60502 916 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 GLI1P08151 1106 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 WEE2P0C1S8 567 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 KCNE1P15382 129 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 BRD2P25440 801 aaKnown RBP17.16■□□□□ 0.34
CBX4-204ENST00000495122 SNX16P57768 344 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 PIGHQ14442 188 aaPredicted RBP17.16■□□□□ 0.34
CBX4-204ENST00000495122 COL19A1Q14993 1142 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 CNGA2Q16280 664 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 LEXMQ3ZCV2 418 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 TCEAL5Q5H9L2 206 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 DNAJC24Q6P3W2 148 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 SCARA5Q6ZMJ2 495 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 FAM43BQ6ZT52 329 aaPredicted RBP17.16■□□□□ 0.34
CBX4-204ENST00000495122 UNC93AQ86WB7 457 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 SLC13A5Q86YT5 568 aaPredicted RBP17.16■□□□□ 0.34
CBX4-204ENST00000495122 KATNAL2Q8IYT4 538 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 GOLGA6L1Q8N7Z2 621 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 FAM71BQ8TC56 605 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 KRT35Q92764 455 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms