RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF77Q15935 545 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 VSTM1Q6UX27 236 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 PRR23CQ6ZRP0 262 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 SPATA17Q96L03 361 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 ZNF396Q96N95 335 aaPredicted RBP24.87■■□□□ 1.57
COL27A1-208ENST00000494780 CYP2S1Q96SQ9 504 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 P2RY13Q9BPV8 354 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 ECT2Q9H8V3 914 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 DUS2Q9NX74 493 aaKnown RBP24.87■■□□□ 1.57
COL27A1-208ENST00000494780 SLC8A2Q9UPR5 921 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 K7ELQ4 463 aaPredicted RBP24.86■■□□□ 1.57
COL27A1-208ENST00000494780 SLC30A4O14863 429 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 ATP2C2O75185 946 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 EGFP01133 1207 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 WARSP23381 471 aaKnown RBP24.86■■□□□ 1.57
COL27A1-208ENST00000494780 LMO2P25791 158 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 GJA4P35212 333 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 GALK1P51570 392 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 FBXO43Q4G163 708 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 CNNM4Q6P4Q7 775 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 EPM2AIP1Q7L775 607 aaPredicted RBP24.86■■□□□ 1.57
COL27A1-208ENST00000494780 ZNF507Q8TCN5 953 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 GAB3Q8WWW8 586 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 MYLPFQ96A32 169 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 SLC22A12Q96S37 553 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 FBRSL1Q9HCM7 1045 aaKnown RBP24.86■■□□□ 1.57
COL27A1-208ENST00000494780 GCNT4Q9P109 453 aa24.86■■□□□ 1.57
COL27A1-208ENST00000494780 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.85■■□□□ 1.57
COL27A1-208ENST00000494780 RNF40O75150 1001 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 TCF3P15923 654 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 IFNAR2P48551 515 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 PSMC1P62191 440 aaKnown RBP24.85■■□□□ 1.57
COL27A1-208ENST00000494780 ASIC1P78348 528 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 TRAPPC11Q7Z392 1133 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 CAMKK1Q8N5S9 505 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 ARL14EPQ8N8R7 260 aaPredicted RBP24.85■■□□□ 1.57
COL27A1-208ENST00000494780 IQUBQ8NA54 791 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 ATP2A3Q93084 1043 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 DHX58Q96C10 678 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 LOXL4Q96JB6 756 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 CRTAC1Q9NQ79 661 aa24.85■■□□□ 1.57
COL27A1-208ENST00000494780 RPP40O75818 363 aaKnown RBP24.84■■□□□ 1.57
COL27A1-208ENST00000494780 PDE6CP51160 858 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 KCNB1Q14721 858 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 FAM26FQ5R3K3 315 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 CACNA2D4Q7Z3S7 1137 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 MMS19Q96T76 1030 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 AGPAT3Q9NRZ7 376 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 TFIP11Q9UBB9 837 aaKnown RBP24.84■■□□□ 1.57
COL27A1-208ENST00000494780 WNT6Q9Y6F9 365 aa24.84■■□□□ 1.57
COL27A1-208ENST00000494780 C2orf78A6NCI8 922 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 TGFB1I1O43294 461 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 CUTAO60888 179 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 YEATS4O95619 227 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 PDGFRBP09619 1106 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 FAM163BP0C2L3 166 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 PFKLP17858 780 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 HDCP19113 662 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 BDNFP23560 247 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 GRIK1P39086 918 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 PXNP49023 591 aaPredicted RBP24.83■■□□□ 1.57
COL27A1-208ENST00000494780 SNRPFP62306 86 aaKnown RBP24.83■■□□□ 1.57
COL27A1-208ENST00000494780 NR1H3Q13133 447 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 SNRNP35Q16560 246 aaKnown RBP24.83■■□□□ 1.57
COL27A1-208ENST00000494780 EML3Q32P44 896 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 SH3RF2Q8TEC5 729 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 CD101Q93033 1021 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 C7orf25Q9BPX7 421 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 EHD2Q9NZN4 543 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 ARHGAP26Q9UNA1 814 aa24.83■■□□□ 1.57
COL27A1-208ENST00000494780 UBE4BO95155 1302 aa24.83■■□□□ 1.56
COL27A1-208ENST00000494780 SPTBN2O15020 2390 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 TACC1O75410 805 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 AKAP3O75969 853 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 TNNI1P19237 187 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 ANXA13P27216 316 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 CYP27A1Q02318 531 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 PSMD6Q15008 389 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 DENND5BQ6ZUT9 1274 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 RDH13Q8NBN7 331 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 TTC16Q8NEE8 873 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 MYCBPAPQ8TBZ2 947 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 PCED1BQ96HM7 432 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 FNBP1Q96RU3 617 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 CGRRF1Q99675 332 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 MAGEF1Q9HAY2 307 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 TRPM5Q9NZQ8 1165 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 ANAPC1Q9H1A4 1944 aa24.82■■□□□ 1.56
COL27A1-208ENST00000494780 RALGAPA1Q6GYQ0 2036 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 GREB1Q4ZG55 1949 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 TRIM66O15016 1216 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 CST3P01034 146 aaPredicted RBP24.81■■□□□ 1.56
COL27A1-208ENST00000494780 CCDC192P0DO97 292 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 DLATP10515 647 aaKnown RBP24.81■■□□□ 1.56
COL27A1-208ENST00000494780 RAP1GAPP47736 663 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 NAIF1Q69YI7 327 aaPredicted RBP24.81■■□□□ 1.56
COL27A1-208ENST00000494780 SHC4Q6S5L8 630 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 UNC13DQ70J99 1090 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 XXYLT1Q8NBI6 393 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 MRPL45Q9BRJ2 306 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms