RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 MCF2P10911 925 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ARF4P18085 180 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ARHGAP1Q07960 439 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 AMHR2Q16671 573 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FAM102AQ5T9C2 384 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 SH3PXD2AQ5TCZ1 1133 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ANKRD22Q5VYY1 191 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ICE2Q659A1 982 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 UNC45BQ8IWX7 931 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 RNF181Q9P0P0 153 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 KCNH4Q9UQ05 1017 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FAM47DPA6NHR8 397 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ASB14A6NK59 587 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 HGSO14964 777 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 PIAS1O75925 651 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 SUN1O94901 812 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ZNF286BP0CG31 522 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 RPL22P35268 128 aaKnown RBP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 GPD2P43304 727 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 PPIL2Q13356 520 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FNBP1LQ5T0N5 605 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 PPP1R21Q6ZMI0 780 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 BBS12Q6ZW61 710 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FASTKD5Q7L8L6 764 aaKnown RBP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 TRABD2AQ86V40 505 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 SUGP1Q8IWZ8 645 aaKnown RBP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FUKQ8N0W3 1084 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 C4orf33Q8N1A6 199 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FAM71DQ8N9W8 422 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 FNIP1Q8TF40 1166 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 AFG1LQ8WV93 481 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHMP3-209ENST00000494623 MCM3APO60318 1980 aa11.76□□□□□ -0.53
CHMP3-209ENST00000494623 GRAP2O75791 330 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 TRUB2O95900 331 aaKnown RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 VDRP11473 427 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 SSTR1P30872 391 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 FOXN2P32314 431 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 NDST1P52848 882 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 NRLP54845 237 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 IL9RQ01113 521 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 LAMC2Q13753 1193 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 TMEM132DQ14C87 1099 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 HIF1AQ16665 826 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 RAB6CQ53S08 254 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 OR6B2Q6IFH4 312 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 PCGF5Q86SE9 256 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 RIBC1Q8N443 379 aaPredicted RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 CXorf38Q8TB03 319 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 PYROXD1Q8WU10 500 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 CPT1BQ92523 772 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 MAGEB18Q96M61 343 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 MAK16Q9BXY0 300 aaKnown RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 TRABDQ9H4I3 376 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 ASB7Q9H672 318 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 SHOC2Q9UQ13 582 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 ACTL7BQ9Y614 415 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 PAPPA2Q9BXP8 1791 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 TCRBV7S3A2A0A539 114 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 P4HA1P13674 534 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 GPX6P59796 221 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 EIF3EP60228 445 aaKnown RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 CDO1Q16878 200 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 MSS51Q4VC12 460 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 CYB5D1Q6P9G0 228 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 FAM47EQ6ZV65 393 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 PPIL6Q8IXY8 311 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 C12orf29Q8N999 325 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 CMASQ8NFW8 434 aaPredicted RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 MCRS1Q96EZ8 462 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 NFKBIZQ9BYH8 718 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 ASNSD1Q9NWL6 643 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 EFR3BQ9Y2G0 817 aa11.75□□□□□ -0.53
CHMP3-209ENST00000494623 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
CHMP3-209ENST00000494623 A0A1W2PPM1 405 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 MAGEB2O15479 319 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 DNAJC8O75937 253 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 UBOX5O94941 541 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 OAS1P00973 400 aaKnown RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 TAC1P20366 129 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 ATICP31939 592 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 RGS7P49802 495 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 ARL4CP56559 192 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 FAM187BQ17R55 369 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 C15orf59Q2T9L4 293 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 SYCP2LQ5T4T6 812 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 TAPT1Q6NXT6 567 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 NPNTQ6UXI9 565 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms